| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2968 |
|---|
| Symbol | |
|---|
| ID | 4878681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 3091414 |
|---|
| End bp | 3092418 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640140263 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_001071238 |
|---|
| Protein GI | 126435547 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0800557 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.179686 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCAAC ATGATTGCCT GCTCCTCGAT CTCGATGGCA CAGTGTTCCG CGGCCACGAA
CCGACCACCG GAGCCGTCGA GAGCCTCGCC GCGCTGAGCG CGCGGGTCCT CTACGTCACC
AACAACGCCT CACGCAGCCC GGGCGACGTC GCAGGCCACC TCGTCGAGTT GGGGTTCGAC
GCGGACGCCG CCGACGTGGT GACCAGCGCC CAGAGCGCAG CGCACCTGCT CGCCGCCCAA
CTTCCCGCTG GGGCGCGGGT GTTGGTCGTG GGCACCGAGG CGTTGGCGGC CGAGGTCGAC
CTCGTGGGAC TGCAGCCCGT CCGGCAGTTC GCCGACGATC CTGCCGCCGT CGTGCAGGGC
CACAACCCGG AGACGGCGTG GGCGGACCTC GCCGAGGCGG CGCTGGCCCT GCGCGCCGGC
GCCCTGTGGG TGGCGGCGAA TGTCGATCTG ACCCTGCCGT CCGAGCGGGG ACTGTTGCCG
GGCAACGGTT CGATGGTCGC CGCCCTGCAG GCCGCGACCG CCCGCGAACC TCAGGTCGCC
GGCAAGCCGC AGCCGACGCT GATGCGGGAT GCGTTGAGCC GGGGCGACTT TCACACACCG
CTGGTGGTCG GTGACCGTCT GGACACCGAC ATCGCCGGCG CCAACGCGGC GTCGTTGCCG
AGCCTGATGG TGCTCAGCGG TGTCAGCACC GCCGACGAGG TGCTGCGTGC GGTGCCCCAG
GAGCGGCCCG ACTACATCGC CGAGGATCTG CGCTCCCTGG ACGCACCGGC CGACGACCTG
CGGGTCGGTC CGCACCCCGG CTGGCGCATC GAGGTCGATG ACACGGACGT GACCGTCCAC
GCCGACGGCG CCGACCGCGG GGACGACCTC TCGGTGCTGC GTGCGACGGC CCACGTGGTG
TGGCAGGCGG ACCTGGCGGG CACGCCGTTC GCGGTCCGCG CGGGTGACGA CACTGCGGCC
GCCGCGCTGC GACGGTGGTC GCTGCTCACC GCCGTGATCG ACTAG
|
|---|
| Protein sequence | MQQHDCLLLD LDGTVFRGHE PTTGAVESLA ALSARVLYVT NNASRSPGDV AGHLVELGFD
ADAADVVTSA QSAAHLLAAQ LPAGARVLVV GTEALAAEVD LVGLQPVRQF ADDPAAVVQG
HNPETAWADL AEAALALRAG ALWVAANVDL TLPSERGLLP GNGSMVAALQ AATAREPQVA
GKPQPTLMRD ALSRGDFHTP LVVGDRLDTD IAGANAASLP SLMVLSGVST ADEVLRAVPQ
ERPDYIAEDL RSLDAPADDL RVGPHPGWRI EVDDTDVTVH ADGADRGDDL SVLRATAHVV
WQADLAGTPF AVRAGDDTAA AALRRWSLLT AVID
|
|---|
| |