| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0444 |
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| Symbol | |
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| ID | 4438848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 473553 |
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| End bp | 474335 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639672302 |
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| Product | HAD family sugar phosphatase |
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| Protein accession | YP_814287 |
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| Protein GI | 116629115 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000000163433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.182428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACATA AAGATTATAA ATGTTACTTA ATTGATTTGG ATGGGACTAT TTATCGCGGT
AGCGATACGA TCGAAAGTGG CGTTAGATTC ATTCATCGTT TGCAAGAGAA AAATATTCCC
CACTTATTTT TAACTAATAA TTCTACTCGT ACGCCGCGAA TGGTAGTTGA TAAATTGCGC
GGACATGGGG TTAACACAGA TATCTATCAT ATTTATACGC CGGTTTTAGC TACGGAGTCT
TACTTGCTTG CTCAAAATCC AGATACTGCT AAGATACCAG TTTATATCAT TGGACAGACA
GGATTAGTGC AAGGTCTGTT AAAAAATGAA CGTTTCTACT ACGATGATCG AAATCCTAAA
TATGTTGTAG TTGGAATGGA TACGGATTTA ACTTATCATA AAATTCGCGT TGCTACTCGC
TCAATTAGAA ATGGCGCAAC TTTTATTGGA ACAAATGCTG ATAAAAATTT GCCTTCTGGG
GATGAGCTAT TGCCTGGTAA CGGTGCACTA TGTACAATGC TAGAAGTAGC AACAGGTGTT
AAGCCCATTT ATATTGGTAA ACCTTCATCA ATTATTGTGG CTAGTGCTTT GAAGATGCTA
AATGCTCAAG GCAGGGATGC AATTTTGGTT GGGGATAACT ATGATACTGA TATTATGGCA
GGCATTAACT GTAATATTGA CTCTTTGTTA ACTTTGACCG GTGTAACTAC TAAGAAGCAA
TTGGCAGAAA GAGATAAGCA GCCAACTTAC GTTGTAGAAA ATCTGGATGA GTGGAAACTA
TGA
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| Protein sequence | MEHKDYKCYL IDLDGTIYRG SDTIESGVRF IHRLQEKNIP HLFLTNNSTR TPRMVVDKLR
GHGVNTDIYH IYTPVLATES YLLAQNPDTA KIPVYIIGQT GLVQGLLKNE RFYYDDRNPK
YVVVGMDTDL TYHKIRVATR SIRNGATFIG TNADKNLPSG DELLPGNGAL CTMLEVATGV
KPIYIGKPSS IIVASALKML NAQGRDAILV GDNYDTDIMA GINCNIDSLL TLTGVTTKKQ
LAERDKQPTY VVENLDEWKL
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