| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1338 |
|---|
| Symbol | |
|---|
| ID | 8648859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 1459197 |
|---|
| End bp | 1460213 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | HAD-superfamily hydrolase, subfamily IIA |
|---|
| Protein accession | YP_003325927 |
|---|
| Protein GI | 269956138 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACGG CTGGTCTGCT CGGCAGTGAC GTCCCACTTG CCGAGGCGTA CGATCTCGCG
CTCGTCGACC TCGACGGTGT CGCGTACCGG GGGCATCTGC CGATCGAGCA TGCGTCCGAC
AGCCTCGTCG CGGCACGGTC GCGAGGACTG CGTCTGCTGT TCGTGACCAA CAACGCCTCG
CGTGAGCCCG AGGACGTGGC CGGTCAGCTC ACGGAGCTCG ACATCCCGAC GTCGGCGGAT
GAGGTGATGA CCGCGGCCCA GGCCTGCGCG GCGCTGCTGC GAACGCGGCT CGAACCTGGC
GCGCGCGTCC TCGTCGTCGG CGGGAAAGGC CTGGTCACGG CGGTGACGGC CGCGGGTTTC
CGCGTCGTGT CGTCCGCCGA CGAGGAGCCG GTCGCCGTCG CGCAGGGGTT CGCTCCGGAC
CTCGCCTGGG CGGACCTCGC AGAGGCGGCC TACGCCGTGT CGGCGGGGGC GTGGCACGTG
GCGAGCAACC GCGACCTGTC GCTGCCCACG GCGCGGGGAT ACGCCCCCGG CAACGGCGCC
CTCGTCGGCG CGGTGGTGGC GGCGACCGGC GTCGAACCGG CGAGCGCAGG AAAGCCCGAG
CCGACGATGT ACCACCTCGC CGTCGAGCGG GTCGGCGCGC AGCGGCCGCT GGTGATCGGC
GACCGCCTCG ACACCGATCT GCAGGGTGCT CGCGCAGGCG ACTACCCGGG CCTGCACGTG
CTGACCGGGG TGTCGTCGGC GCGCGACGAC GTCCTCGCCG AGCCGGCACT TCGGCCGCAC
TTCATCGGCG CCGACCTTCG TTCGTTGCTG GAGACCCACC CAGTGCCCGA GCCCGGTGCC
GACGGGTGGT GGGAGTGCGC CGGACGGGCG GCTCGCGTCG TCGACGGCCG CCTCGAGCTC
GATCGCGAAG GTGTGCGCGG TATCGACGTC GTGCGCGCGG CGTGCGCGGC GGCGTGGGAT
GCCGCCGATG CCGGCCGACC CGTGGCACCG GACAGCGTTC CGGAGCTCAC CGCGTAG
|
|---|
| Protein sequence | MSTAGLLGSD VPLAEAYDLA LVDLDGVAYR GHLPIEHASD SLVAARSRGL RLLFVTNNAS
REPEDVAGQL TELDIPTSAD EVMTAAQACA ALLRTRLEPG ARVLVVGGKG LVTAVTAAGF
RVVSSADEEP VAVAQGFAPD LAWADLAEAA YAVSAGAWHV ASNRDLSLPT ARGYAPGNGA
LVGAVVAATG VEPASAGKPE PTMYHLAVER VGAQRPLVIG DRLDTDLQGA RAGDYPGLHV
LTGVSSARDD VLAEPALRPH FIGADLRSLL ETHPVPEPGA DGWWECAGRA ARVVDGRLEL
DREGVRGIDV VRAACAAAWD AADAGRPVAP DSVPELTA
|
|---|
| |