Gene Mkms_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_2021 
Symbol 
ID4613587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2140423 
End bp2141196 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content69% 
IMG OID639791687 
ProductHAD family hydrolase 
Protein accessionYP_938010 
Protein GI119868058 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0647] Predicted sugar phosphatases of the HAD superfamily 
TIGRFAM ID[TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCTCCA ACACCCGATG CTGGCTCACC GACATGGACG GCGTGCTCGT CCGCGAAGAG 
CACGCCCTGC CCGGTGCCGC CGAGTTCCTC GCCCGGCTCG TCGAACGCGA GCGGCCGTTC
CTGGTCCTGA CGAACAACTC GATCTTCACC CCGCGTGACC TGGCCGCCCG GCTCGCGCGG
TCCGGGCTCA TCGTGCCGGA GGAGGCGATC TGGACCTCGG CGCTGGCCAC CGCGACCTTC
CTCAGCGACC AGTTGCCGGG CGGATCGGCC TACGTCATCG GCGAGGCGGG CCTGACCACC
GCGCTGCACG AGGCCGGGTA CACGCTGACC GACGTCGGCC CGGACTTCGT TGTGCTCGGG
GAGACCCGCA CCTACTCGTT CGAGGCGATC ACCAAGGCCG TCCGGCTGAT CCTCGGCGGT
GCCCGGTTCA TCGCCACCAA CCCGGACGTG ACCGGTCCGT CCGCGGAGGG TCCACTGCCC
GCCACCGGAT CGGTGGCCGC CATGATCACC AAGGCCACCG GCCGCGAACC CTACTTCGTG
GGAAAACCGA ATCCGATGAT GTTCCGCAGC GCCCTCAACC GCATCGAGGC GCACTCGGAG
GGCACGGTGA TGGTGGGCGA CCGGATGGAC ACCGACGTCG TGGCGGGTAT CGAGGCGGGG
CTGGAGACCA TCCTCGTCCT GACCGGGTCG ACGACCATCG AGGACGTCGA GCGGTATCCG
TTCCGGCCCA GCCGGGTACT GCCGTCCATC GCCGAAGCCA TCGACCTGGT GTGA
 
Protein sequence
MRSNTRCWLT DMDGVLVREE HALPGAAEFL ARLVERERPF LVLTNNSIFT PRDLAARLAR 
SGLIVPEEAI WTSALATATF LSDQLPGGSA YVIGEAGLTT ALHEAGYTLT DVGPDFVVLG
ETRTYSFEAI TKAVRLILGG ARFIATNPDV TGPSAEGPLP ATGSVAAMIT KATGREPYFV
GKPNPMMFRS ALNRIEAHSE GTVMVGDRMD TDVVAGIEAG LETILVLTGS TTIEDVERYP
FRPSRVLPSI AEAIDLV