| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5439 |
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| Symbol | |
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| ID | 8336793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6263981 |
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| End bp | 6265015 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644958537 |
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| Product | HAD-superfamily hydrolase, subfamily IIA |
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| Protein accession | YP_003116139 |
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| Protein GI | 256394575 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCTG AGACCAACGA GGGCGCCGGC AACGGCGGAC CCGTGCCGTT CCTGACGTCC
CAGAAGCCGC TCGCCGAGGC GTACGACACC GCGCTGCTGG ACCTGGACGG CGTGGTGTAC
CGCGGCGCCG ACGCGGTGCC GCACGCCGCC GAGGCGCTGC GCGCCGCGCA GGAGCACGGC
ATGCGGCGCA CCTACGTGAC CAACAACGCC TCGCGCACCC CGGAGGCCGT CGCCGAGCAC
CTGAACGAGC TCGGCGTCGC CGCGGCGGCG CACGAGGTCG TCACCTCGGC CCAAGCCGCC
GCGCGCATGG CGGTGGCCTG CGTCGGCGAG GGCGGCCGGG TCCTGGTGAT CGGCGGCGAC
GGACTGCGGG CGGCGGTGCG CGAGCTGGGG CTGAAGGCGG TGGCCGGCGC CGACGACATG
CCCGACATCG TGGTCCAGGG CTATTCGCCC GACCTCGGCT GGAAGGACCT GGCCGAGGCG
ACGTACGCGG TGCGCCGCGG CGTGCCGTGG ATCGCCACCA ACACCGACAC CACGGTCCCG
ACCGCGCGCG GTATCGCCCC GGGCAACGGC ACGCTGGTCG CCGCGGTCGG CGCCGCCTCG
GGCAAGACCC CGCAGGTCGC GGGCAAGCCG GAGCTGCCGC TGCACCGCGA GTCGATCCTG
CGCTCCGGCG CCACGCGGCC GCTGATCGTC GGCGACCGGC TGGACACCGA CATCGAGGGC
GCGGTCCGCG GGAACACCGA CAGCCTGCTG GTCTTCACCG GCGTGACCAC GGCGCGCGAC
CTGCTCGCCG CGCCGCCGGA CCGGCGCCCC AGCTACCTCG CCGAGGACCT GCGCGGGCTG
CTGACCGCGC ACGTCGCGCC GACCCGCGAC GGGGTGAACT TCGTCTCGGC GCGCTGGACC
GCCGCGGTGG TCTCCGAGCA GGTCGTGCTG CACGGGCACG GGGACAAGAT GGACGCGCTG
CGGGCGATGT GCGCCGCGGT GTGGGAGTAC GGCCGCGAGG TCGACGTCGA GGACGCGCTG
GCGAGTCTGG CTTAG
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| Protein sequence | MTAETNEGAG NGGPVPFLTS QKPLAEAYDT ALLDLDGVVY RGADAVPHAA EALRAAQEHG
MRRTYVTNNA SRTPEAVAEH LNELGVAAAA HEVVTSAQAA ARMAVACVGE GGRVLVIGGD
GLRAAVRELG LKAVAGADDM PDIVVQGYSP DLGWKDLAEA TYAVRRGVPW IATNTDTTVP
TARGIAPGNG TLVAAVGAAS GKTPQVAGKP ELPLHRESIL RSGATRPLIV GDRLDTDIEG
AVRGNTDSLL VFTGVTTARD LLAAPPDRRP SYLAEDLRGL LTAHVAPTRD GVNFVSARWT
AAVVSEQVVL HGHGDKMDAL RAMCAAVWEY GREVDVEDAL ASLA
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