56 homologs were found in PanDaTox collection
for query gene Fjoh_1418 on replicon NC_009441
Organism: Flavobacterium johnsoniae UW101



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009441  Fjoh_1418  hydroxymethylglutaryl-CoA reductase, degradative  100 
 
 
437 aa  904    Flavobacterium johnsoniae UW101  Bacteria  normal  0.984667  n/a   
 
 
-
 
NC_014230  CA2559_04185  3-hydroxy-3-methylglutaryl-coenzyme A reductase  66.28 
 
 
436 aa  630  1e-179  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_1037  hydroxymethylglutaryl-CoA reductase, degradative  58.66 
 
 
436 aa  511  1e-144  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_1290  hydroxymethylglutaryl-CoA reductase, degradative  41.32 
 
 
406 aa  285  1.0000000000000001e-75  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2030  hypothetical protein  37.8 
 
 
432 aa  264  2e-69  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_0431  hydroxymethylglutaryl-CoA reductase, degradative  37.77 
 
 
456 aa  264  2e-69  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.316381 
 
 
-
 
NC_006368  lpp2035  hypothetical protein  37.56 
 
 
432 aa  264  3e-69  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_0981  hydroxymethylglutaryl-CoA reductase, degradative  36.79 
 
 
444 aa  261  1e-68  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008527  LACR_1664  3-hydroxy-3-methylglutaryl-coenzyme A reductase  35.63 
 
 
410 aa  257  3e-67  Lactococcus lactis subsp. cremoris SK11  Bacteria  hitchhiker  0.0024632  n/a   
 
 
-
 
NC_009513  Lreu_0206  3-hydroxy-3-methylglutaryl-coenzyme A reductase  34.49 
 
 
420 aa  250  3e-65  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2621  hydroxymethylglutaryl-CoA reductase, degradative  35.27 
 
 
425 aa  246  4e-64  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2568  hydroxymethylglutaryl-CoA reductase, degradative  35.27 
 
 
425 aa  246  4e-64  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0287  hydroxymethylglutaryl-CoA reductase, degradative  37.72 
 
 
429 aa  240  2.9999999999999997e-62  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP2121  hydroxymethylglutaryl-CoA reductase, degradative  36.12 
 
 
425 aa  239  1e-61  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1317  3-hydroxy-3-methylglutaryl-CoA reductase  36.87 
 
 
427 aa  238  1e-61  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1141  hydroxymethylglutaryl-CoA reductase, degradative  36.99 
 
 
440 aa  236  7e-61  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00353445 
 
 
-
 
NC_008553  Mthe_0936  hydroxymethylglutaryl-CoA reductase, degradative  37 
 
 
419 aa  233  4.0000000000000004e-60  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_008698  Tpen_0927  hydroxymethylglutaryl-CoA reductase, degradative  36.97 
 
 
428 aa  231  2e-59  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_008532  STER_0620  3-hydroxy-3-methylglutaryl-coenzyme A reductase  34.32 
 
 
423 aa  225  1e-57  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4013  hydroxymethylglutaryl-CoA reductase, degradative  37.67 
 
 
428 aa  221  1.9999999999999999e-56  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.316182 
 
 
-
 
NC_008543  Bcen2424_3505  hydroxymethylglutaryl-CoA reductase, degradative  37.67 
 
 
428 aa  221  1.9999999999999999e-56  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_013926  Aboo_1461  hydroxymethylglutaryl-CoA reductase, degradative  36.61 
 
 
420 aa  220  3.9999999999999997e-56  Aciduliprofundum boonei T469  Archaea  normal  0.478544  n/a   
 
 
-
 
NC_009972  Haur_3539  hydroxymethylglutaryl-CoA reductase, degradative  35.98 
 
 
441 aa  220  3.9999999999999997e-56  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0777406  n/a   
 
 
-
 
NC_008530  LGAS_1373  hydroxymethylglutaryl-CoA reductase  33.72 
 
 
429 aa  216  4e-55  Lactobacillus gasseri ATCC 33323  Bacteria  normal  hitchhiker  0.0000000000375721 
 
 
-
 
NC_008531  LEUM_0335  hydroxymethylglutaryl-CoA reductase  35.62 
 
 
401 aa  215  9.999999999999999e-55  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3073  hydroxymethylglutaryl-CoA reductase, degradative  35.47 
 
 
428 aa  214  2.9999999999999995e-54  Pseudomonas putida F1  Bacteria  normal  0.272086  normal 
 
 
-
 
NC_013440  Hoch_3406  hydroxymethylglutaryl-CoA reductase, degradative  36.82 
 
 
443 aa  212  1e-53  Haliangium ochraceum DSM 14365  Bacteria  normal  0.121756  normal  0.0808381 
 
 
-
 
NC_013440  Hoch_5714  hydroxymethylglutaryl-CoA reductase, degradative  35.27 
 
 
402 aa  202  7e-51  Haliangium ochraceum DSM 14365  Bacteria  normal  0.148177  normal 
 
 
-
 
NC_010085  Nmar_1560  hydroxymethylglutaryl-CoA reductase, degradative  36.27 
 
 
418 aa  202  9.999999999999999e-51  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_011728  BbuZS7_0705  hydroxymethylglutaryl-CoA reductase, degradative  34.15 
 
 
422 aa  190  5e-47  Borrelia burgdorferi ZS7  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_1799  3-hydroxy-3-methylglutaryl-coenzyme A reductase  32.49 
 
 
363 aa  190  5e-47  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0360  hydroxymethylglutaryl-CoA reductase, degradative  30.12 
 
 
444 aa  169  1e-40  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010525  Tneu_1359  3-hydroxy-3-methylglutaryl coenzyme A reductase  25.76 
 
 
395 aa  67  0.0000000006  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal 
 
 
-
 
NC_009634  Mevan_1099  3-hydroxy-3-methylglutaryl coenzyme A reductase  24.48 
 
 
411 aa  66.2  0.000000001  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_008701  Pisl_0814  3-hydroxy-3-methylglutaryl coenzyme A reductase  27.53 
 
 
399 aa  63.9  0.000000006  Pyrobaculum islandicum DSM 4184  Archaea  normal  hitchhiker  0.00207544 
 
 
-
 
NC_009637  MmarC7_1086  3-hydroxy-3-methylglutaryl coenzyme A reductase  24.34 
 
 
408 aa  63.9  0.000000006  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
CP001800  Ssol_1610  3-hydroxy-3-methylglutaryl Coenzyme A reductase  22.46 
 
 
409 aa  63.5  0.000000007  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_009073  Pcal_1085  3-hydroxy-3-methylglutaryl-coenzyme A reductase  25.43 
 
 
399 aa  62.8  0.00000001  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_009135  MmarC5_1589  3-hydroxy-3-methylglutaryl-coenzyme A reductase  24.07 
 
 
408 aa  60.8  0.00000004  Methanococcus maripaludis C5  Archaea  normal  0.346816  n/a   
 
 
-
 
NC_009975  MmarC6_0860  3-hydroxy-3-methylglutaryl coenzyme A reductase  24.07 
 
 
408 aa  58.2  0.0000003  Methanococcus maripaludis C6  Archaea  normal  0.187348  n/a   
 
 
-
 
NC_008228  Patl_0427  hydroxymethylglutaryl-CoA reductase (NADPH)  25.71 
 
 
395 aa  57  0.0000006  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.601953  n/a   
 
 
-
 
NC_009376  Pars_0796  3-hydroxy-3-methylglutaryl coenzyme A reductase  26.22 
 
 
398 aa  57  0.0000006  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
NC_007355  Mbar_A1972  hydroxymethylglutaryl-CoA reductase (NADPH)  25.16 
 
 
418 aa  57  0.0000006  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009635  Maeo_0718  3-hydroxy-3-methylglutaryl coenzyme A reductase  24.94 
 
 
418 aa  55.8  0.000001  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_011138  MADE_03398  Hydroxymethylglutaryl-coenzyme A reductase  24.27 
 
 
396 aa  53.1  0.000009  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009954  Cmaq_0412  3-hydroxy-3-methylglutaryl coenzyme A reductase  22.65 
 
 
410 aa  50.8  0.00005  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
NC_007955  Mbur_1098  3-hydroxy-3-methylglutaryl-coenzyme A reductase  24.72 
 
 
414 aa  50.4  0.00006  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
BN001302  ANIA_03817  hypothetical protein similar to HMG-CoA reductase (Eurofung)  21.91 
 
 
1125 aa  50.1  0.00008  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_009440  Msed_1649  3-hydroxy-3-methylglutaryl-coenzyme A reductase  25.27 
 
 
410 aa  48.9  0.0002  Metallosphaera sedula DSM 5348  Archaea  normal  0.982475  normal 
 
 
-
 
NC_007520  Tcr_1717  hydroxymethylglutaryl-CoA reductase (NADPH)  21.94 
 
 
352 aa  47  0.0006  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009046  PICST_72872  3-hydroxy-3-methyl-glutaryl coenzyme A reductase (HMG-CoA)  23.78 
 
 
1047 aa  46.6  0.0008  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
NC_006691  CNF04830  hydroxymethylglutaryl-CoA reductase (NADPH), putative  24.42 
 
 
1283 aa  45.8  0.001  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_013158  Huta_0276  3-hydroxy-3-methylglutaryl Coenzyme A reductase  22.38 
 
 
403 aa  44.3  0.004  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05704  3-hydroxy-3-methylglutaryl CoA reductase  27.5 
 
 
420 aa  43.9  0.005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000087  hydroxymethylglutaryl-CoA reductase  23.68 
 
 
420 aa  43.9  0.006  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1947  hydroxymethylglutaryl-coenzyme A reductase  24.71 
 
 
424 aa  43.5  0.008  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
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