| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0360 |
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| Symbol | |
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| ID | 8709089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 388687 |
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| End bp | 390021 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646482477 |
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| Product | hydroxymethylglutaryl-CoA reductase, degradative |
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| Protein accession | YP_003373611 |
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| Protein GI | 283782857 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1257] Hydroxymethylglutaryl-CoA reductase |
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| TIGRFAM ID | [TIGR00532] hydroxymethylglutaryl-CoA reductase, degradative |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCTT TTCGTGAATT AAGCGTGGAA AATCGCATAA AAACCTTGCA AAATGAGGGC
GCAATTAACG AGACTGAGGC AGCATTTTTG CTTAAACAGT TTGCGGAAAG TTCTGATACT
ACAATTCCTG CAGACGTTGC AAATCATATG ATTGAGCATC AAATTGGAAA GTATACGCTG
CCGGTTGGCG TTGTGCGTGG GCTGATTGTG AACGGCGAAG TGTGTGACGT GCTGGTTGCA
ACTGAGGAGC CATCCGTGAT TGCAGCTGCG TGCAATGGGG CGCGAATTGC TGCAGCGACT
GACGTTGGAT ACGGAATTAT TGCGCGCTCC CCACAATACG TGACTACAGC ACAAATAGCT
TTTGAGGACG CAGACGGAAG CGTGGCGGCG CGCTTGAGCA GAATCGTTGA AGATAAAGAA
AAGGTTGCAG AACTGTTGCG CATTGCAAAC GCGTCACACC CATCAATAAG TAAAAGGGGT
GGCGGCGCGC GAAAATGCCG CGCTTCAGCT TTGCACGGCT TCGCAAAGCT CGAGATTGAC
GTAGACACAT GCGACGCAAT GGGCGCAAAC ACAGTGAACA CTATGGGCGA AGCCGTCAAA
GCCCAGCTGG AAAGCTGGCT CGGCGTGCAG GCGCTAGTTG CAATACTCAC GAACACCAGC
CGCGTTGCCA GCACAGCAGA AGTGCATATA CCGGTTGAAG CACTAGCATC CAGGCGGCTG
GAAGACTCTG AACGAGAGCG CGAGGGAAAG TGCCTTGCGC GCCGAATCGC GGCATTGAGC
GCGCTTGCCG CCAGCGACCC TGCACGCGCC GCCACGCACA ACAAAGGAAT CCTAAACGGA
ATCGCAGGAG CCGCGCTCGC GTCCGGGAAT GATACGCGAG CGCTAGAATC GGCAGCACAC
GCGTGGGCGG CGCGCTCCGG TCGCTACCTA CCACTGTCAA AGTGGAACAC CGAAACTTTA
AACGGAAAAA CCATACTCCA CGGCAGGATT GAAATTCCGC TACAGATCGG CATTGTCGGC
GGCTCAATCT CATCGCTTCC AATGGCAAAA CTCGCGATCA AAATCGGCAA ATACAAAAAC
GCAAACGACT TTAGAAATAC GCTTGCCGCG CTCGGTTTGG TGCAAAATCT TGCGGCTCTT
CGCGCACTAG CAGGCCCTGG AATTCAAGCA GGTCACATGG CATTGCAGTC TTCAAACCTG
GCAATTGCAG CAGGTGCCAA AGGTGCGGAA ATCGCAGAAA TCACGCATAA TATTTTGCAA
CTTAGCCCTG CAGAAAGAAC TACAGAAAAA GTTACGCAAT TACTTCAAAA GTTACGAGAA
TCAAGTAAAA ATTAA
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| Protein sequence | MAAFRELSVE NRIKTLQNEG AINETEAAFL LKQFAESSDT TIPADVANHM IEHQIGKYTL
PVGVVRGLIV NGEVCDVLVA TEEPSVIAAA CNGARIAAAT DVGYGIIARS PQYVTTAQIA
FEDADGSVAA RLSRIVEDKE KVAELLRIAN ASHPSISKRG GGARKCRASA LHGFAKLEID
VDTCDAMGAN TVNTMGEAVK AQLESWLGVQ ALVAILTNTS RVASTAEVHI PVEALASRRL
EDSEREREGK CLARRIAALS ALAASDPARA ATHNKGILNG IAGAALASGN DTRALESAAH
AWAARSGRYL PLSKWNTETL NGKTILHGRI EIPLQIGIVG GSISSLPMAK LAIKIGKYKN
ANDFRNTLAA LGLVQNLAAL RALAGPGIQA GHMALQSSNL AIAAGAKGAE IAEITHNILQ
LSPAERTTEK VTQLLQKLRE SSKN
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