32 homologs were found in PanDaTox collection
for query gene HMPREF0424_0360 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013721  HMPREF0424_0360  hydroxymethylglutaryl-CoA reductase, degradative  100 
 
 		 444 aa  893    Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_008527  LACR_1664  3-hydroxy-3-methylglutaryl-coenzyme A reductase  39.36 
 
 		 410 aa  258  2e-67  Lactococcus lactis subsp. cremoris SK11  Bacteria  hitchhiker  0.0024632  n/a   
 
 
-
 
NC_009513  Lreu_0206  3-hydroxy-3-methylglutaryl-coenzyme A reductase  38.2 
 
 		 420 aa  255  1.0000000000000001e-66  Lactobacillus reuteri DSM 20016  Bacteria  normal  1  n/a   
 
 
-
 
NC_002976  SERP2121  hydroxymethylglutaryl-CoA reductase, degradative  36.94 
 
 		 425 aa  253  6e-66  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_2621  hydroxymethylglutaryl-CoA reductase, degradative  37.1 
 
 		 425 aa  244  3e-63  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_2568  hydroxymethylglutaryl-CoA reductase, degradative  37.1 
 
 		 425 aa  244  3e-63  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_3505  hydroxymethylglutaryl-CoA reductase, degradative  38.35 
 
 		 428 aa  243  7e-63  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010515  Bcenmc03_4013  hydroxymethylglutaryl-CoA reductase, degradative  38.35 
 
 		 428 aa  241  1e-62  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.316182 
 
 
-
 
NC_009512  Pput_3073  hydroxymethylglutaryl-CoA reductase, degradative  37.76 
 
 		 428 aa  238  2e-61  Pseudomonas putida F1  Bacteria  normal  0.272086  normal  1 
 
 
-
 
NC_008553  Mthe_0936  hydroxymethylglutaryl-CoA reductase, degradative  39.71 
 
 		 419 aa  237  3e-61  Methanosaeta thermophila PT  Archaea  normal  1  n/a   
 
 
-
 
NC_013515  Smon_1290  hydroxymethylglutaryl-CoA reductase, degradative  38.82 
 
 		 406 aa  232  8.000000000000001e-60  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_004116  SAG1317  3-hydroxy-3-methylglutaryl-CoA reductase  37.3 
 
 		 427 aa  231  2e-59  Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
-
 
NC_008532  STER_0620  3-hydroxy-3-methylglutaryl-coenzyme A reductase  36.88 
 
 		 423 aa  230  4e-59  Streptococcus thermophilus LMD-9  Bacteria  normal  1  n/a   
 
 
-
 
NC_013926  Aboo_1461  hydroxymethylglutaryl-CoA reductase, degradative  36.83 
 
 		 420 aa  228  1e-58  Aciduliprofundum boonei T469  Archaea  normal  0.478544  n/a   
 
 
-
 
NC_008531  LEUM_0335  hydroxymethylglutaryl-CoA reductase  34.62 
 
 		 401 aa  224  3e-57  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_0287  hydroxymethylglutaryl-CoA reductase, degradative  35.28 
 
 		 429 aa  218  1e-55  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008698  Tpen_0927  hydroxymethylglutaryl-CoA reductase, degradative  36.53 
 
 		 428 aa  217  2.9999999999999998e-55  Thermofilum pendens Hrk 5  Archaea  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_0431  hydroxymethylglutaryl-CoA reductase, degradative  34.6 
 
 		 456 aa  213  5.999999999999999e-54  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.316381 
 
 
-
 
NC_009972  Haur_3539  hydroxymethylglutaryl-CoA reductase, degradative  35.59 
 
 		 441 aa  213  7.999999999999999e-54  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0777406  n/a   
 
 
-
 
NC_009767  Rcas_0981  hydroxymethylglutaryl-CoA reductase, degradative  34.98 
 
 		 444 aa  211  2e-53  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011728  BbuZS7_0705  hydroxymethylglutaryl-CoA reductase, degradative  37.5 
 
 		 422 aa  209  8e-53  Borrelia burgdorferi ZS7  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_1141  hydroxymethylglutaryl-CoA reductase, degradative  34.9 
 
 		 440 aa  198  1.0000000000000001e-49  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  hitchhiker  0.00353445 
 
 
-
 
NC_010085  Nmar_1560  hydroxymethylglutaryl-CoA reductase, degradative  35.92 
 
 		 418 aa  193  7e-48  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  1 
 
 
-
 
NC_008530  LGAS_1373  hydroxymethylglutaryl-CoA reductase  34.52 
 
 		 429 aa  191  2.9999999999999997e-47  Lactobacillus gasseri ATCC 33323  Bacteria  normal  1  hitchhiker  0.0000000000375721 
 
 
-
 
NC_008528  OEOE_1799  3-hydroxy-3-methylglutaryl-coenzyme A reductase  35.34 
 
 		 363 aa  187  3e-46  Oenococcus oeni PSU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_3406  hydroxymethylglutaryl-CoA reductase, degradative  35.62 
 
 		 443 aa  184  4.0000000000000006e-45  Haliangium ochraceum DSM 14365  Bacteria  normal  0.121756  normal  0.0808381 
 
 
-
 
NC_006369  lpl2030  hypothetical protein  32.37 
 
 		 432 aa  182  1e-44  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_014230  CA2559_04185  3-hydroxy-3-methylglutaryl-coenzyme A reductase  32.61 
 
 		 436 aa  182  1e-44  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_006368  lpp2035  hypothetical protein  32.13 
 
 		 432 aa  181  2e-44  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009441  Fjoh_1418  hydroxymethylglutaryl-CoA reductase, degradative  30.12 
 
 		 437 aa  156  6e-37  Flavobacterium johnsoniae UW101  Bacteria  normal  0.984667  n/a   
 
 
-
 
NC_013162  Coch_1037  hydroxymethylglutaryl-CoA reductase, degradative  30.9 
 
 		 436 aa  153  5e-36  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_5714  hydroxymethylglutaryl-CoA reductase, degradative  33.82 
 
 		 402 aa  147  4.0000000000000006e-34  Haliangium ochraceum DSM 14365  Bacteria  normal  0.148177  normal  1 
 
 
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