| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1560 |
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| Symbol | |
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| ID | 5773942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1427870 |
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| End bp | 1429126 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641317212 |
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| Product | hydroxymethylglutaryl-CoA reductase, degradative |
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| Protein accession | YP_001582894 |
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| Protein GI | 161529068 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1257] Hydroxymethylglutaryl-CoA reductase |
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| TIGRFAM ID | [TIGR00532] hydroxymethylglutaryl-CoA reductase, degradative |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATT CGTCCATTTC AAAATTTTTT GAAAAAACAA GAACAGAAAG ATTAGATGTT
ATCAAAAATT TTGCAAATCT TTCAGAAGAT GACGTAAAAT CATTAGAACT ACCAGATGGC
GGAATTACAT TTGATAAAGC AGACAAAATG GTGGAAAATG CGTTTGGAAC ATTTTCACTT
CCACTAGGAG TTGCAACCAA CTTCAAAATT AACAATAAAG ATTATCTTGT TCCCATGGTG
ATTGAAGAGC CTTCTGTGAT TGCAGCAGCA TCAAAAGCAG CAAAACTTGC AAGACCTAAA
GGTGGATTTG CAGTAGTAGC TGATGAATCC TACAGTATTG GGCAAATTCA AGTTTTAGGC
ACAGATATTG ATAATGCTAT TTCTAAAATT AAAGAAAACA TTAAGGAAAT TCTAGAACTT
GCAAATTCAA AAAGTAATAC TCTTTCTAAG ATGGGAAAAG GTGCAAAAGA GATTACTTGT
AAAAAACTTG ATACTGATTT TGAACCAATG TTAATTGTTG AATTATTAAT TGATGTGGGT
GATGCAATGG GTGCAAATGT TACTAATACG ATGTGTGAAG GTGTAGCACC ATTAATTGAA
AAATTAACTA GTGGAAAAAC ACTTCTTCGA ATTTTATCAA ACTATTCCAC AAGACGAATG
GTAAAGGCAA CTGCTGTATT TGACAAAGAA TCAGTTGGAG GCGAAAAAGT TGTAGATAAC
ATGATTCATG CATATCAATT TGCAAAACAT GATGTGTATA GAGCAGTAAC TCACAACAAA
GGAATTATGA ATGGAATTAT TGCAGTAGCT AATGCTACAG GACAAGACAG TCGTGCAATT
GAAGCTGCGG CAAATGCATA TGCATCACGT TCTGGACAAT ACCGGTCGCT ATCAGAGTGG
ACTAAGGATT CAGATGGAAA TCTTGTTGGT ACATTGGAAA TCCCATTATC TGTTGGCATT
GTAGGTGGAA TAATCAATGT TCATCCAGTT GCAAAAATCT GTACTAAAAT TTTAGGCGCA
GAATCTGCAA AAGAGATGGC ATGTATAATA ACTGCAACAG GATTGGCTCA AAACTTTAGT
GCCATGAGGG CACTTGCAAC TGATGGAATT CAGAAAGGAC ACATGAGGCT ACATGCAAGG
AATCTAGCAT CTGCAGCAGG TGCTTCTACT GAACAAATTG ACAAGATAGT TTCTCAGATG
ATTGAAGAAA ACAACATTTC AGTAAATAGA GCAAAAGAAC TGCTTGAACA AAATTAA
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| Protein sequence | MPDSSISKFF EKTRTERLDV IKNFANLSED DVKSLELPDG GITFDKADKM VENAFGTFSL
PLGVATNFKI NNKDYLVPMV IEEPSVIAAA SKAAKLARPK GGFAVVADES YSIGQIQVLG
TDIDNAISKI KENIKEILEL ANSKSNTLSK MGKGAKEITC KKLDTDFEPM LIVELLIDVG
DAMGANVTNT MCEGVAPLIE KLTSGKTLLR ILSNYSTRRM VKATAVFDKE SVGGEKVVDN
MIHAYQFAKH DVYRAVTHNK GIMNGIIAVA NATGQDSRAI EAAANAYASR SGQYRSLSEW
TKDSDGNLVG TLEIPLSVGI VGGIINVHPV AKICTKILGA ESAKEMACII TATGLAQNFS
AMRALATDGI QKGHMRLHAR NLASAAGAST EQIDKIVSQM IEENNISVNR AKELLEQN
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