| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3073 |
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| Symbol | |
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| ID | 5195368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3457559 |
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| End bp | 3458845 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640587519 |
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| Product | hydroxymethylglutaryl-CoA reductase, degradative |
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| Protein accession | YP_001268385 |
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| Protein GI | 148548283 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1257] Hydroxymethylglutaryl-CoA reductase |
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| TIGRFAM ID | [TIGR00532] hydroxymethylglutaryl-CoA reductase, degradative |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.272086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCG ACTCCCGCCT GCCCGCTTTC CGCAACCTAT CCCCTGCCGC GCGCCTGGAT
CATATCGGCC AGCTACTTGG CCTGAGCCAC GGCGATGTCA GCCTGCTGGC CAACGCCGGC
GCCCTGCCGA TGGACATCGC CAACGGCATG ATCGAAAACG TCATCGGCAC CTTCGAGCTG
CCCTTTGCCG TGGCCAGCAA CTTCCAGGTC AACGGCCGTG ATGTGCTGGT GCCGCTGGTG
GTGGAAGAAC CCTCCATCGT CGCCGCGGCT TCGTACATGG CCAAGTTGGC CCGCGCCAAT
GGCGGCTTCA TCACCTCCAG CAGCGCCCCG CTGATGCGCG CCCAGGTACA GATCGTCGGC
ATCCAGGACC CGCTCAATGC ACGCCTGAGC CTGCTGCGGC GCAAGGACGA AATCATTGAG
CTGGCCAACC GCAAGGACCA GTTGCTCAAC AGCCTCGGCG GTGGCTGCCG CGATATCGAA
GTACACACCT TCGCCAATAC CCCGCGCGGC CCGATGCTGG TGGCGCACCT GATCGTCGAT
GTGCGCGATG CCATGGGTGC CAACACCGTC AACACCATGG CCGAGGCCGT GGCGCCGCTG
ATGGAAGCGA TCACCGGGGG CCAGGTACGC CTGCGCATTC TGTCCAACCT GGCCGACCTG
CGCCTGGCCC GGGCCCAGGT GCGCATCACC CCGGAACAAT TGAAAACGGC TGAGTTCAGC
GGCGAGGCGG TGATCGAAGG CATCCTCGAC GCCTACGCCT TAGCGGCGGT CGACCCCTAC
CGCGCGGCCA CCCACAACAA GGGCATCATG AACGGCATCG ACCCGCTGAT CGTCGCCACT
GGCAACGACT GGCGTGCCGT TGAGGCCGGC GCCCATGCGT TTGCCTGCCG CAGTGGCCAC
TATGGTTCGC TGACCACCTG GGAAAAGGAC GGTAACGGCC ACCTGGTCGG CACCCTGGAA
ATGCCGATGC CCGTGGGCCT GGTCGGCGGC GCCACCAAGA CGCACCCGCT GGCGCAACTG
TCGCTGCGCA TCCTGCAGGT GAAAACCGCC CAGGACCTGG CGGAGATTGC CGTGGCCGTG
GGCCTGGCGC AAAACCTCGG GGCCATGCGC GCCCTTGCCA CCGAAGGCAT CCAGCGCGGC
CACATGGCCC TGCATGCGCG CAATATCGCC GTGGTCGCGG GTGCCCGGGG CGACGAGGTG
GACTGGGTTG CCCGGCAACT GGTAGAAAAC CACGATGTGC GTGCCGACCG CGCCGTCGCG
CTACTGAAAC AGAAGCGCGG CGAATGA
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| Protein sequence | MSLDSRLPAF RNLSPAARLD HIGQLLGLSH GDVSLLANAG ALPMDIANGM IENVIGTFEL
PFAVASNFQV NGRDVLVPLV VEEPSIVAAA SYMAKLARAN GGFITSSSAP LMRAQVQIVG
IQDPLNARLS LLRRKDEIIE LANRKDQLLN SLGGGCRDIE VHTFANTPRG PMLVAHLIVD
VRDAMGANTV NTMAEAVAPL MEAITGGQVR LRILSNLADL RLARAQVRIT PEQLKTAEFS
GEAVIEGILD AYALAAVDPY RAATHNKGIM NGIDPLIVAT GNDWRAVEAG AHAFACRSGH
YGSLTTWEKD GNGHLVGTLE MPMPVGLVGG ATKTHPLAQL SLRILQVKTA QDLAEIAVAV
GLAQNLGAMR ALATEGIQRG HMALHARNIA VVAGARGDEV DWVARQLVEN HDVRADRAVA
LLKQKRGE
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