| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1037 |
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| Symbol | |
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| ID | 8367458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1232587 |
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| End bp | 1233897 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644983464 |
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| Product | hydroxymethylglutaryl-CoA reductase, degradative |
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| Protein accession | YP_003141153 |
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| Protein GI | 256819874 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1257] Hydroxymethylglutaryl-CoA reductase |
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| TIGRFAM ID | [TIGR00532] hydroxymethylglutaryl-CoA reductase, degradative |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGA TAGACGGTTT TTCTAAACTT ACCAAAGCCC AAAAGATTGC GTGGCTTTGC
GATACTTATT TCCCTAATAT AGAGAATGCT GCTTCTTTTT TTGAAAAGTA CCACAACGCT
GATACTGACC TTCAGAAACT GCACGACGAG TTTATTGAAA ATACAGTCTC TAACTACTAT
CTGCCCTTTG CGGTAGCGCC TAACTTCCTC ATCAACGGGC GCACTTATAC CGTACCTATG
GCTATTGAAG AGAGTTCGGT GGTGGCAGCT GCTAGCAGGG CGGCTAAATT CTGGCAAAGC
CGTGGCGGTT TTCATACCGA AGTGCTTTCT ACCGAAAAAA CGGGGCACGT ACATTTCTTC
TTCTACGGTG AAAAAACTAA TTTAGAAAAC TTCTTCAACC ACATACAACC CTTGATGCTC
GCTAAAGCAC AACCCATTAC TGCCAATATG GAAAAACGCG GGGGCGGTAT TACTTCTCTT
ACCTTAGTGG ACAAAACCGA TGCTTTGGCG CACTATTATC AGCTTTCGGC TACTTTTGAA
ACCTTAGACG CTATGGGTGC GAACTTCATC AATTCGTGCT TAGAATCCTT TGCACAGACG
TTTAGAGAAG AAGCGGAACG GGACGCCTCT ATCGGTGATA AGTATGAAAT CGTAATGTCG
ATACTCTCGA ACTATGTGCC TAACTGTTTG GTGCGCGCAA AAGTACAATG CCCTATTGAG
GAGTTGGAGA TTGCTCAGTT AAAAGGTGCT GAAGCTGCAA AGAAATTTGT ACAAGCTCTC
GCTATTGCCA ATGCTGATGT GTACCGTGCT ACCACTCACA ACAAAGGTAT AATGAACGGT
ATTGACTCGG TAATTTTGGC TACAGGTAAT GATTTTCGTG CCATAGAAGC TGGTGCACAC
GCTTATGCTG CTCGTAGCGG ACAGTACAAG AGCTTATCGG CTGCGTGGAT AGAGGGCGAT
ACTTTCTTCT TTGCCCTTGA ACTGCCTTTG GCTTTGGGCA CCGTGGGCGG ACTTACTACA
TTGCACCCTT TGGTAAAAAC GGCTCTTGAA ATCCTTGAAA AACCTAACGC TCGCGAGCTA
ATGCAGATAG TGGCTTGTGT GGGGTTAGCA CAGAACTTTT CGGCTGTAAG CTCGCTGATT
AGTCTGGGAA TCCAGAAGGG GCATATGAAA ATGCACTTGA ACAACATTTT TAACCAATTA
GGGGCTACTG AAGAGGAGAA GCGCGTACTT TCTTCTTATT TTAAAGATAA AACCGTAACA
TATAACGATG TAGCCGAAGC TCTCAAGAAA ATTAGAAAAT TAGAAAATTA G
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| Protein sequence | MKQIDGFSKL TKAQKIAWLC DTYFPNIENA ASFFEKYHNA DTDLQKLHDE FIENTVSNYY
LPFAVAPNFL INGRTYTVPM AIEESSVVAA ASRAAKFWQS RGGFHTEVLS TEKTGHVHFF
FYGEKTNLEN FFNHIQPLML AKAQPITANM EKRGGGITSL TLVDKTDALA HYYQLSATFE
TLDAMGANFI NSCLESFAQT FREEAERDAS IGDKYEIVMS ILSNYVPNCL VRAKVQCPIE
ELEIAQLKGA EAAKKFVQAL AIANADVYRA TTHNKGIMNG IDSVILATGN DFRAIEAGAH
AYAARSGQYK SLSAAWIEGD TFFFALELPL ALGTVGGLTT LHPLVKTALE ILEKPNAREL
MQIVACVGLA QNFSAVSSLI SLGIQKGHMK MHLNNIFNQL GATEEEKRVL SSYFKDKTVT
YNDVAEALKK IRKLEN
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