Gene Mthe_0936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0936 
Symbol 
ID4463329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1020938 
End bp1022197 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content60% 
IMG OID639699955 
Producthydroxymethylglutaryl-CoA reductase, degradative 
Protein accessionYP_843364 
Protein GI116754246 
COG category[I] Lipid transport and metabolism 
COG ID[COG1257] Hydroxymethylglutaryl-CoA reductase 
TIGRFAM ID[TIGR00532] hydroxymethylglutaryl-CoA reductase, degradative 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGTT CAAGACTTCC GGGATTCTAC AAGCTGCCTC CCGATGAGCG GCTCGGGAAG 
ATCGTTGAGG CCTGCGGTGA TGCTGAGATA AAGGAGATGA TAAAGAGCGG TTTGAGCCTG
GACCAGGCAG ACAAGATGGT GGAGAACGTG ATCGGTCTCT TCCAGGTTCC GCTCGGCGTC
GCTACAAACT TCATAATAGA CGGGCGTGAG GTGCTGGTGC CAATGGCCAC AGAGGAGCCA
TCTGTCATAG CAGCGGCCAG CAACGGAGCC AGGATGGCGC GCGATGGCGG GGGATTCTTC
ACCAGCTCGA CAGGGCCGGT GATGAGAGCC CAGATACAGG CTGTCGATCT GAAGGATCCG
TATGGCGCCA GGTGCAGGAT CCTGGAGCAT TCGTCTGAAA TAACAAAAAT CGCAAACGAG
GTCGACCCGA TGCTCGTCAG GCTCGGCGGG GGAGCTGTGG GCCTGGAGGT TCATGTCATC
GATTCCAGAG CCGGTCCGAT GGTCGTCACG CATCTCCTGG TCGACTGCAG GGATGCGATG
GGCGCGAACG CTGTGAACAC GATGGCAGAG GCTGTGGCCC CTGAGATCGA GCGGCTTACA
GGCGGGAAGG TTCACCTCCG GATAATCTCA AACCTGGCGG ACACGCGCCT CGCCAGAGCG
CGGGCGGTTT TCAAGGCAGA TGCGATCGGC GGGGCTGAGG TCGTCTCCGC GATCTTCAAG
ACCGCAGCGC TCGCCGAGGT CGATCCGTAC AGGGCCGCCA CGCACAACAA GGGGATCATG
AACGGTGTTA CAGCTCTTGT TCTCGCGACA GGCAATGATA CCCGCGCTGT CGAAGCGGGA
GCGCATGCAT ACGCCGCCAG ATCAGGGCGG TACGCATCGC TATCGAGATA CGAGATCGAT
GAGAATGGAG ATCTTGTGGG CACGATAGAG CTTCCCATGG CGGTTGGGCT TGTGGGCGGG
GCCACGCGTG TGCATCCCGT AGCTAGGGCG GCTGTAAGGA TGCTCGGGGT GAGATCCGCG
GATGAGCTCA GCAGGGTGAT AGCGGCAGTC GGCCTCGCTC AGAACTTCGC GGCGCTGAGA
GCTCTCGCCA CAGAGGGCAT CCAGCGGGGG CACATGTCGC TGCACGCAAG AAACGTCGCG
CTCCAGGCGG GAGCAAGGGG AGAGATGGTG GAGATCATCG CTGAGAGGAT GGCATCCGAG
CGGAGGATTA ACCTGGAGAG AGCATCCGAG CTTCTCAGAG AGCTGGGTGG TTCCTCTTGA
 
Protein sequence
MMSSRLPGFY KLPPDERLGK IVEACGDAEI KEMIKSGLSL DQADKMVENV IGLFQVPLGV 
ATNFIIDGRE VLVPMATEEP SVIAAASNGA RMARDGGGFF TSSTGPVMRA QIQAVDLKDP
YGARCRILEH SSEITKIANE VDPMLVRLGG GAVGLEVHVI DSRAGPMVVT HLLVDCRDAM
GANAVNTMAE AVAPEIERLT GGKVHLRIIS NLADTRLARA RAVFKADAIG GAEVVSAIFK
TAALAEVDPY RAATHNKGIM NGVTALVLAT GNDTRAVEAG AHAYAARSGR YASLSRYEID
ENGDLVGTIE LPMAVGLVGG ATRVHPVARA AVRMLGVRSA DELSRVIAAV GLAQNFAALR
ALATEGIQRG HMSLHARNVA LQAGARGEMV EIIAERMASE RRINLERASE LLRELGGSS