Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0427 |
Symbol | |
ID | 4173718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 504787 |
End bp | 505974 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638053430 |
Product | hydroxymethylglutaryl-CoA reductase (NADPH) |
Protein accession | YP_660011 |
Protein GI | 109896756 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1257] Hydroxymethylglutaryl-CoA reductase |
TIGRFAM ID | [TIGR00533] 3-hydroxy-3-methylglutaryl Coenzyme A reductase, hydroxymethylglutaryl-CoA reductase (NADP) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.601953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGATA ATAAAGCAGC ACCTTCCATT CCTCGTGATA AAGAGCACGA TCATAGCCAG AATATGGCAC AGCAGCGCCG AACATTTGTA AAAGAACACA CCCAAAGCGA GCTTAGTCAT GTGGGGCATT ACTCCTTAAG CCCAGAGCAA ACCGCGGGCA ATATTGAAAA TTTCATCGGT GTTGCCCAAG TGCCCATCGG CTTAGCAGGG CCAGTTAAGG TCAATGGCGA ATATGCGAAG GGTGAGTTCT ACGTGCCACT TGCTACCACA GAGGGCACCT TGGTCGCTAG TTACAACCGC GGCATGCGGG TCCTCAGCGC CGCTGGTGGC GTAAAAGTGA CAGTTGTCGA TGATGTCATG CAGCGTGCCC CAGTGTTTAT TTTTGAAGAT GCCCGTCAAG CGCAAACTTT TGGCAATTGG GTAACCGACA ATTTCGAGGA CATAAAAGCA CAAGCCGAAA CCACCACCAG CGTGGGAAAA CTACGTAACA TCGAACAGTA CGCTGCCGCG CGCATGCAAT ATTTACGGTT TAATTTCACA ACCGGTGATG CTGCTGGGCA AAATATGGTG GGCAAAGCCA CGTTTGCGGC TTGCGAATGG ATGAAAGCAA ACTTCCCTGG GGTCGGCTTG CAGCGCTATA ACTTGTCTGG TGCCATGGAT ACCGACAAAA AACACTCCCA GCTGAATACC CTTCACAGTC GCGGCAAGCG GGTGATTGCT GAGGCAACCA TCAGCAGTGA GATTTTAGAG TCAAAACTGG GTGTATCAGC ACAAATGCTG TTTAAAATGC GTCAAATATC CAATATGGGC AGTTTTATGG CCGGCTCTAT AAATAATGGC TCCCATTCGG CTAACGGAAT TACTGCCATG TTTATCGCCT GCGGCCAAGA TGCCGCCAAT GTGGCAGAAT CATCCGCCGC TTTATCGTTT GTGGACGTAG ATGAGCAAGG TAACTTTTAT ATCGCTATTA CCCTGCCCTC TTTGATTGTT GCGACCTTTG GTGGCGGTAC TGCCCTTGCC ACACAAAAAG AATGCTTAGA AATGATGGAT TGCTTCGGTG AAGGTAAAGC ACGCAAACTT GCAGAGATTA TCGGCGCTAC CGTACTTGCA GGAGAGCTGT CATTAAGTGC CGCCGTGTTA GCAGGCGACT GGGTGACCAG TCATGATGCC CTAGGGCGTA ATCGCTAA
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Protein sequence | MSDNKAAPSI PRDKEHDHSQ NMAQQRRTFV KEHTQSELSH VGHYSLSPEQ TAGNIENFIG VAQVPIGLAG PVKVNGEYAK GEFYVPLATT EGTLVASYNR GMRVLSAAGG VKVTVVDDVM QRAPVFIFED ARQAQTFGNW VTDNFEDIKA QAETTTSVGK LRNIEQYAAA RMQYLRFNFT TGDAAGQNMV GKATFAACEW MKANFPGVGL QRYNLSGAMD TDKKHSQLNT LHSRGKRVIA EATISSEILE SKLGVSAQML FKMRQISNMG SFMAGSINNG SHSANGITAM FIACGQDAAN VAESSAALSF VDVDEQGNFY IAITLPSLIV ATFGGGTALA TQKECLEMMD CFGEGKARKL AEIIGATVLA GELSLSAAVL AGDWVTSHDA LGRNR
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