55 homologs were found in PanDaTox collection
for query gene Patl_0427 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_0427  hydroxymethylglutaryl-CoA reductase (NADPH)  100 
 
 
395 aa  821    Pseudoalteromonas atlantica T6c  Bacteria  normal  0.601953  n/a   
 
 
-
 
NC_011138  MADE_03398  Hydroxymethylglutaryl-coenzyme A reductase  60.31 
 
 
396 aa  521  1e-146  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03508  Hydroxymethylglutaryl-coenzyme A reductase  53.5 
 
 
514 aa  427  1e-118  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0718  3-hydroxy-3-methylglutaryl coenzyme A reductase  42.67 
 
 
418 aa  304  2.0000000000000002e-81  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_010525  Tneu_1359  3-hydroxy-3-methylglutaryl coenzyme A reductase  42.31 
 
 
395 aa  293  4e-78  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal 
 
 
-
 
CP001800  Ssol_1610  3-hydroxy-3-methylglutaryl Coenzyme A reductase  44.67 
 
 
409 aa  291  1e-77  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_1099  3-hydroxy-3-methylglutaryl coenzyme A reductase  41.84 
 
 
411 aa  290  3e-77  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009975  MmarC6_0860  3-hydroxy-3-methylglutaryl coenzyme A reductase  42.37 
 
 
408 aa  288  9e-77  Methanococcus maripaludis C6  Archaea  normal  0.187348  n/a   
 
 
-
 
NC_009135  MmarC5_1589  3-hydroxy-3-methylglutaryl-coenzyme A reductase  42.37 
 
 
408 aa  288  9e-77  Methanococcus maripaludis C5  Archaea  normal  0.346816  n/a   
 
 
-
 
NC_009637  MmarC7_1086  3-hydroxy-3-methylglutaryl coenzyme A reductase  42.37 
 
 
408 aa  288  1e-76  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_2647  3-hydroxy-3-methylglutaryl Coenzyme A reductase  44.53 
 
 
407 aa  280  4e-74  Methanosphaerula palustris E1-9c  Archaea  normal  0.259986  normal  0.338347 
 
 
-
 
NC_009440  Msed_1649  3-hydroxy-3-methylglutaryl-coenzyme A reductase  45.99 
 
 
410 aa  280  4e-74  Metallosphaera sedula DSM 5348  Archaea  normal  0.982475  normal 
 
 
-
 
NC_009784  VIBHAR_05704  3-hydroxy-3-methylglutaryl CoA reductase  42.61 
 
 
420 aa  276  4e-73  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007955  Mbur_1098  3-hydroxy-3-methylglutaryl-coenzyme A reductase  42.97 
 
 
414 aa  275  1.0000000000000001e-72  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009376  Pars_0796  3-hydroxy-3-methylglutaryl coenzyme A reductase  43.56 
 
 
398 aa  273  4.0000000000000004e-72  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_3004  3-hydroxy-3-methylglutaryl coenzyme A reductase  43.2 
 
 
401 aa  273  5.000000000000001e-72  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011313  VSAL_II0253  putative 3-hydroxy-3-methylglutaryl coenzyme a reductase  39.49 
 
 
419 aa  270  2.9999999999999997e-71  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0262386  n/a   
 
 
-
 
NC_013457  VEA_000087  hydroxymethylglutaryl-CoA reductase  42.43 
 
 
420 aa  268  8.999999999999999e-71  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_0137  3-hydroxy-3-methylglutaryl coenzyme A reductase  41.87 
 
 
426 aa  268  1e-70  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_009073  Pcal_1085  3-hydroxy-3-methylglutaryl-coenzyme A reductase  43.08 
 
 
399 aa  267  2.9999999999999995e-70  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_009954  Cmaq_0412  3-hydroxy-3-methylglutaryl coenzyme A reductase  42.44 
 
 
410 aa  266  5.999999999999999e-70  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
NC_009456  VC0395_0662  hydroxymethylglutaryl-coenzyme A reductase  42.57 
 
 
420 aa  265  7e-70  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1947  hydroxymethylglutaryl-coenzyme A reductase  40.06 
 
 
424 aa  265  1e-69  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008701  Pisl_0814  3-hydroxy-3-methylglutaryl coenzyme A reductase  42.31 
 
 
399 aa  261  1e-68  Pyrobaculum islandicum DSM 4184  Archaea  normal  hitchhiker  0.00207544 
 
 
-
 
NC_013202  Hmuk_1499  3-hydroxy-3-methylglutaryl Coenzyme A reductase  40.67 
 
 
403 aa  261  1e-68  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.398419  normal 
 
 
-
 
NC_007355  Mbar_A1972  hydroxymethylglutaryl-CoA reductase (NADPH)  40.4 
 
 
418 aa  258  1e-67  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_013922  Nmag_2929  3-hydroxy-3-methylglutaryl Coenzyme A reductase  40.26 
 
 
410 aa  258  1e-67  Natrialba magadii ATCC 43099  Archaea  normal  0.342818  n/a   
 
 
-
 
NC_013743  Htur_0537  3-hydroxy-3-methylglutaryl Coenzyme A reductase  40.26 
 
 
408 aa  258  2e-67  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008942  Mlab_1655  3-hydroxy-3-methylglutaryl-coenzyme A reductase  41.07 
 
 
404 aa  253  4.0000000000000004e-66  Methanocorpusculum labreanum Z  Archaea  normal  hitchhiker  0.0000342006 
 
 
-
 
NC_013158  Huta_0276  3-hydroxy-3-methylglutaryl Coenzyme A reductase  39.3 
 
 
403 aa  251  2e-65  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_009051  Memar_2365  3-hydroxy-3-methylglutaryl coenzyme A reductase  41.62 
 
 
402 aa  237  3e-61  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2174  hydroxymethylglutaryl-coenzyme A reductase  35.47 
 
 
395 aa  236  7e-61  Coxiella burnetii RSA 331  Bacteria  normal  0.0352988  n/a   
 
 
-
 
NC_006691  CNF04830  hydroxymethylglutaryl-CoA reductase (NADPH), putative  38.08 
 
 
1283 aa  225  1e-57  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_011697  PHATRDRAFT_16870  predicted protein  39.38 
 
 
367 aa  216  5e-55  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_012029  Hlac_2019  3-hydroxy-3-methylglutaryl Coenzyme A reductase  38.44 
 
 
407 aa  207  2e-52  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal  0.439309 
 
 
-
 
NC_009727  CBUD_0151  3-hydroxy-3-methylglutaryl-coenzyme A reductase  32 
 
 
364 aa  200  3e-50  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_009046  PICST_72872  3-hydroxy-3-methyl-glutaryl coenzyme A reductase (HMG-CoA)  36.05 
 
 
1047 aa  199  6e-50  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
BN001302  ANIA_03817  hypothetical protein similar to HMG-CoA reductase (Eurofung)  36.29 
 
 
1125 aa  197  3e-49  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
BN001307  ANIA_01593  conserved hypothetical protein  38.18 
 
 
416 aa  185  1.0000000000000001e-45  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_010117  COXBURSA331_A0723  hydroxymethylglutaryl-CoA reductase (NADPH)  34.6 
 
 
355 aa  183  5.0000000000000004e-45  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.000000000015079  n/a   
 
 
-
 
NC_009727  CBUD_0622  3-hydroxy-3-methylglutaryl-coenzyme A reductase  34.6 
 
 
357 aa  183  5.0000000000000004e-45  Coxiella burnetii Dugway 5J108-111  Bacteria  hitchhiker  0.000221084  n/a   
 
 
-
 
NC_007520  Tcr_1717  hydroxymethylglutaryl-CoA reductase (NADPH)  34.58 
 
 
352 aa  182  7e-45  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP2121  hydroxymethylglutaryl-CoA reductase, degradative  22.97 
 
 
425 aa  61.2  0.00000003  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1664  3-hydroxy-3-methylglutaryl-coenzyme A reductase  23.33 
 
 
410 aa  58.9  0.0000002  Lactococcus lactis subsp. cremoris SK11  Bacteria  hitchhiker  0.0024632  n/a   
 
 
-
 
NC_008553  Mthe_0936  hydroxymethylglutaryl-CoA reductase, degradative  24.52 
 
 
419 aa  55.1  0.000002  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_008530  LGAS_1373  hydroxymethylglutaryl-CoA reductase  23.4 
 
 
429 aa  54.7  0.000003  Lactobacillus gasseri ATCC 33323  Bacteria  normal  hitchhiker  0.0000000000375721 
 
 
-
 
NC_008531  LEUM_0335  hydroxymethylglutaryl-CoA reductase  23.88 
 
 
401 aa  51.2  0.00003  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_1290  hydroxymethylglutaryl-CoA reductase, degradative  23.93 
 
 
406 aa  50.8  0.00004  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2030  hypothetical protein  22.44 
 
 
432 aa  48.9  0.0001  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009441  Fjoh_1418  hydroxymethylglutaryl-CoA reductase, degradative  25.71 
 
 
437 aa  48.1  0.0003  Flavobacterium johnsoniae UW101  Bacteria  normal  0.984667  n/a   
 
 
-
 
NC_006368  lpp2035  hypothetical protein  21.13 
 
 
432 aa  48.1  0.0003  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011728  BbuZS7_0705  hydroxymethylglutaryl-CoA reductase, degradative  38.89 
 
 
422 aa  45.8  0.001  Borrelia burgdorferi ZS7  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1141  hydroxymethylglutaryl-CoA reductase, degradative  22.09 
 
 
440 aa  43.5  0.007  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00353445 
 
 
-
 
NC_009632  SaurJH1_2621  hydroxymethylglutaryl-CoA reductase, degradative  22.16 
 
 
425 aa  43.1  0.008  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2568  hydroxymethylglutaryl-CoA reductase, degradative  22.16 
 
 
425 aa  43.1  0.008  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>