Gene Mboo_0137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0137 
Symbol 
ID5411200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp130301 
End bp131581 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content62% 
IMG OID640867353 
Product3-hydroxy-3-methylglutaryl coenzyme A reductase 
Protein accessionYP_001403304 
Protein GI154149686 
COG category[I] Lipid transport and metabolism 
COG ID[COG1257] Hydroxymethylglutaryl-CoA reductase 
TIGRFAM ID[TIGR00533] 3-hydroxy-3-methylglutaryl Coenzyme A reductase, hydroxymethylglutaryl-CoA reductase (NADP) 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGTG ATGAGGGTCA CCGCGATCCG GCCCGGGCAG GGGACGGCCC GGATCACGGA 
AAGGAAGCGG AGATAAAGAA TAAGCTGAGG GACGGCTCGG TCCGGCTCTA CGAACTCGAA
AAGCAGCTCC CCCCGGTTGA TGCTGTCAGG GTGCGCCGGG AGTTCATTGA GGAGGAGACC
GGAACCACAC TCGAAAACAT CGGGATCTTC TCGATCGATG TGGACCGGGC ATCCACCCGG
AACTGTGAGA ACATGATCGG CACCGTGCAG GTACCTGTCG GCGTTGCCGG GCCTCTGGCC
ATTAACGGCG AGTACGCGAA AGGTCTGTTC TGGCTGCCCC TTGCGACCAC CGAGGGAGCA
CTCATCGCCT CGGTGAACCG CGGGGCAGGA GCGATCACAA AAGCCGGCGG CGCCGAGGTG
CGCATCCTGC ACGATGGCAT GACCCGGGCG CCGGTCTTTG CGGCAAAGAG TGTCGGGCAC
GCAAAGGAGA TCGCAGACTG GGCAGAAGCC CACTTCGATG ATCTCGCCGC GATTGCCGCG
ACGACCACCA ACCACGGGAA AATGACCGGC CTTGTCACCT TTGTCACGGG CACGAGCGTA
TTTATCCGGC TCGAATTTGA CACCAAGGAC GCGATGGGCA TGAACATGGT CACCATCGCA
GGCGCAAAAA TTGCCGATGA AATAGCGCAG GCCACAGGCG CCCGGCTGAT TGCACTCTCG
GGGAACATGT GCTCCGACAA GAAGCCGGCC GCAATCAACG GGATCATGGG CCGGGGACGC
AGCGTTGTCG CGGGAGTTGC CCTTTCCCAT GAGCAGATAG CAAAGATCCT CAAGACCGAT
GCGGCCACGA TGGTCGAGGT AAATTACCGC AAAAACCTCG TCGGCTCGGC ACGGGCGGGC
GCAATGGGAT TCAATGCCCA CGCAGCCAAT GTTGTTGCCG CGATGTTTAT TGCCTGCGGG
CAGGACGCGG CCCATGCCAT TGACGGCAGC ACCTGCATGA CCACGATCGA TGCCACGGAA
TCCGGGGTGT ACGTTGCAGT CACGCTCCCC TCGCTCCCGG TCGGTACTGT CGGTGGCGGG
ACGAGTGTGG ATACACAGCA GGAGTGCCTG AAGATCTTAG GAGTGGCCGG CGGCGGATCG
CCCGCGGGAG CCAATGCAAG GAAACTGGCG GAGATCATCG CAGCCGGTGT TCTTGCCGGG
GAACTCTCCC TGATTGGGGC TTTGGCTGCC CAGCACCTCG CCCGTGCCCA CCAGGAACTG
GGCCGGGGCG TAAAGCGCTA A
 
Protein sequence
MAGDEGHRDP ARAGDGPDHG KEAEIKNKLR DGSVRLYELE KQLPPVDAVR VRREFIEEET 
GTTLENIGIF SIDVDRASTR NCENMIGTVQ VPVGVAGPLA INGEYAKGLF WLPLATTEGA
LIASVNRGAG AITKAGGAEV RILHDGMTRA PVFAAKSVGH AKEIADWAEA HFDDLAAIAA
TTTNHGKMTG LVTFVTGTSV FIRLEFDTKD AMGMNMVTIA GAKIADEIAQ ATGARLIALS
GNMCSDKKPA AINGIMGRGR SVVAGVALSH EQIAKILKTD AATMVEVNYR KNLVGSARAG
AMGFNAHAAN VVAAMFIACG QDAAHAIDGS TCMTTIDATE SGVYVAVTLP SLPVGTVGGG
TSVDTQQECL KILGVAGGGS PAGANARKLA EIIAAGVLAG ELSLIGALAA QHLARAHQEL
GRGVKR