| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1086 |
|---|
| Symbol | |
|---|
| ID | 5329321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 1056805 |
|---|
| End bp | 1058031 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640793633 |
|---|
| Product | 3-hydroxy-3-methylglutaryl coenzyme A reductase |
|---|
| Protein accession | YP_001330303 |
|---|
| Protein GI | 150403009 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1257] Hydroxymethylglutaryl-CoA reductase |
|---|
| TIGRFAM ID | [TIGR00533] 3-hydroxy-3-methylglutaryl Coenzyme A reductase, hydroxymethylglutaryl-CoA reductase (NADP) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATA ACGTGAATAT TGAAGAAATC GTTGAAAAAC TGATTAAAAA AGAAATAAAA
GTTTACCAGC TTGATTCAGA ATTTGGAGAA CGAAATGCAG TTACTGCAAG ACGAAAATAC
CTTGAAAAGC TATCAAACGT TGAAACAAGA CATATTCAGG AATACACTCT TGATGAAAAA
CTTGCGATGC AGAAAAACAT TGAAAACATG ATTGGTGCAA TTCAAATTCC ACTCGGATTT
GCGGGACCAA TTTCAATTAA TGGAAAGTAT GCACAAGGTG AGTTTAACGT GCCTTTCGCG
ACTACGGAAG GTGCTCTCGT TGCGTCTATT AACAGAGGTT GCAGTATTAT CACAAAATGT
GGTGGTGCAA CTGTACGCGT GATTGACGAC AAGATGACCC GTGCACCAAT AATTAAAACG
AACTCTATAG TCGATGCTTT GAAATTAAAA GAGTGGATAT TAGACAACTT CACGAAGATA
AAAGAAGTCG CTGAATCTAC AACAAGACAT GGAAAACTAA TTCAAATATC CCCAATTTTA
ATAGTTGGAA GAAATGTATA TCCAAGATTT ACATTTAAAA CAGGAGATGC GATGGGGATG
AACATGGTTA CTATTGCAAC TGAAAAAGCC TGTTCATTTA TCGAATCGGA ACTTAAAAAA
GAAGGAATAA TTGTGGATAC TGTTGCATTG AGCGGTAATG TGTGTACTGA TAAAAAACCG
GCTGCAATAA ATTTGATTGA AGGAAGGGGA AAAAGTGTTG TTGCAGAAGT ATTTTTAAAA
GAAGAATACG TTGAAAAATA TTTAAAAACT ACCTCAAAAG CGATTGAACA GGTGAATACT
TACAAAAATT TGATTGGTTC AGCAATAAGT TCCTCTTTAG GCTTTAACGC GCAGTATGCA
AATATTGTTG GAGCCCTATT TTTAGCGACA GGACAGGACG AAGCACACAT CGTTGAAGGC
AGTATGGGAA TCACAACTGC AGAATGTACT GGCGACGGAC TTTATTTCTC AGTTACGCTT
CCAGATTTAC CTGTAGCCAC GATTGGTGGC GGAACAAGAG TTGAAACCCA GCGAGAATGT
CTCGAAATAA TTGGATGCGC GGGTGCTGAA AAGGCAGTTA AATTTGCAGA AATTGCAGGA
GCTGTTGTTT TAGCAGGTGA ATTATCACTT ATTGGCGCCC TTGCTGCAGG ACATCTTGCA
AAAGCGCATT CTGAACTTGG AAGATAA
|
|---|
| Protein sequence | MENNVNIEEI VEKLIKKEIK VYQLDSEFGE RNAVTARRKY LEKLSNVETR HIQEYTLDEK
LAMQKNIENM IGAIQIPLGF AGPISINGKY AQGEFNVPFA TTEGALVASI NRGCSIITKC
GGATVRVIDD KMTRAPIIKT NSIVDALKLK EWILDNFTKI KEVAESTTRH GKLIQISPIL
IVGRNVYPRF TFKTGDAMGM NMVTIATEKA CSFIESELKK EGIIVDTVAL SGNVCTDKKP
AAINLIEGRG KSVVAEVFLK EEYVEKYLKT TSKAIEQVNT YKNLIGSAIS SSLGFNAQYA
NIVGALFLAT GQDEAHIVEG SMGITTAECT GDGLYFSVTL PDLPVATIGG GTRVETQREC
LEIIGCAGAE KAVKFAEIAG AVVLAGELSL IGALAAGHLA KAHSELGR
|
|---|
| |