| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1649 |
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| Symbol | |
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| ID | 5104854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1590196 |
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| End bp | 1591428 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640507540 |
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| Product | 3-hydroxy-3-methylglutaryl-coenzyme A reductase |
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| Protein accession | YP_001191728 |
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| Protein GI | 146304412 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1257] Hydroxymethylglutaryl-CoA reductase |
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| TIGRFAM ID | [TIGR00533] 3-hydroxy-3-methylglutaryl Coenzyme A reductase, hydroxymethylglutaryl-CoA reductase (NADP) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.982475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAAA TTGATGAAGT TGTGGAGAAG GTAGTTAAGG GAGAGATAGA GCTTCACAAG
GTTGATGAGC ACCTCGATGG AAACGCTGCC GTAGTAGCCA GGAGGATGGC AATAGAGAAG
CTCACGGGAA AGAGTTTTCC TTCGATTGGG GCAACGATCA TAGACTACCT CGATGTTAAG
GGAAGGAACG CCGAGAACGT GATAGGGGCT GCCCAGGTAC CTCTAGGGGT CGCCGGTCCC
ATCATGGTTG AGGGAGATTA TGCTAAGGGC TCATTTTTCG TTCCCCTTGC CACGACGGAA
GGGGCGTTGA TTGCCAGCGT TAATAGGGGA ATGAAGGTCC TGAGACATGC TGGCCCCGTT
AGGACAAAGG TCCTGAGAGA TGGGATGACA AGGGCTCCAG TGTTTACCTT TGAGTCAGCG
CTGGACGCCT TCAAGTTCAC GGAATGGGTC AAGAGCAACT TTCAGGAGAT AAAGAGGGTT
GCCGAGTCTA CCTCGTCTCA CGCTAGACTT ATCAAGATAG ATCCACTACA GCTCGGAAAT
AACGTCTGGC TGAGGTTTGA GTATGAGACC GGTGATGCCA TGGGAATGAA CATGGTTACC
GTGGCAACCG AGGCCGCATG CTCCTACCTA GAGGAGAAGT TCCCCAGGGC GAGGTGCGTT
GCAGTTAGCG GAAATGCCTG CAGTGACAAG AAACAGTCGA TGACCAACGA ACTCCTGGGA
AGGGGTAAGA GCGTGGTCGC TGAGGCATTG ATACCCTCAA GGATTCTCGA GACTCACCTG
AGAACTACTG CAGACAGGAT TCAGGAGGTC AACCTGAGAA AGAACTGGTT GGGTGGAGCT
AGGGCTGGCA CAATCTTCCA GTTCAATGCC CACTTTGCAA ACATCATTGC TGCTATCTTC
ATCGCCACAG GACAGGACGT TGCGCAGGTG GTTGAGAGCA GTACGGGTTA TACCTGGGTA
GAGAACAGGA ACGGTGATCT ATACATCTCC GTCACCCTTC CCTCCCTCGA GGTAGGTACT
GTTGGAGGAG GGACGAGGTT ACCCACGCAA AGGGAGGCCC TCTCTATGAT GGGAGTAGAC
GGAGGTGGCA ATCCACCTGG GAGTAATGCC AGAAAACTTG CAGAGATAAT CTCCGCCGCC
GTCTTGGCTG GCGAGCTGAA CCTTCTGTCT GCTCTCTCCA CAAGGGAGCT AGGGAAAGCA
CACCTGCGCT TAGGTAGGGG CATGAAGACT TAA
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| Protein sequence | MDKIDEVVEK VVKGEIELHK VDEHLDGNAA VVARRMAIEK LTGKSFPSIG ATIIDYLDVK
GRNAENVIGA AQVPLGVAGP IMVEGDYAKG SFFVPLATTE GALIASVNRG MKVLRHAGPV
RTKVLRDGMT RAPVFTFESA LDAFKFTEWV KSNFQEIKRV AESTSSHARL IKIDPLQLGN
NVWLRFEYET GDAMGMNMVT VATEAACSYL EEKFPRARCV AVSGNACSDK KQSMTNELLG
RGKSVVAEAL IPSRILETHL RTTADRIQEV NLRKNWLGGA RAGTIFQFNA HFANIIAAIF
IATGQDVAQV VESSTGYTWV ENRNGDLYIS VTLPSLEVGT VGGGTRLPTQ REALSMMGVD
GGGNPPGSNA RKLAEIISAA VLAGELNLLS ALSTRELGKA HLRLGRGMKT
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