Gene Mhun_3004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_3004 
Symbol 
ID3922892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3283751 
End bp3284956 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content54% 
IMG OID637898613 
Product3-hydroxy-3-methylglutaryl coenzyme A reductase 
Protein accessionYP_504410 
Protein GI88604232 
COG category[I] Lipid transport and metabolism 
COG ID[COG1257] Hydroxymethylglutaryl-CoA reductase 
TIGRFAM ID[TIGR00533] 3-hydroxy-3-methylglutaryl Coenzyme A reductase, hydroxymethylglutaryl-CoA reductase (NADP) 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGT ACCTCCGCAG ACTGCGGGAT GGAACACTGA AATTATATGC GCTTGAGAAA 
GAACTTGCCC CCGCTGATGC TGTTTCCATC CGCCGGAAGT TTATCGAAGA AGAGACCGGA
GTTCCGCTTG ACCGGATTGG TGACTGTACC ATCTCTCTTG ACGCAGTGGT AAAGAAGAAC
TGCGAGAATA TGATTGGCAC GATCCAGGTA CCACTCGGGG TTGCAGGACC TGTCAGGATA
AAAGGAGAGT ATGCAGACGG AACGATGTAT CTCCCGCTTG CAACCACAGA AGGGGCACTT
ATTGCATCAG TGAACCGGGG CTGCAGCCTT ATTACAGCAG CAGGAGGAGC CGATGTCAGA
ATATTAAAGG ACGGTATGAC CCGTGCCCCC GTTTTTGCTG CTGACAGCAT TGTCCATGCA
AAGGCCGTGT GTGACTGGAT ACATGCTCAT GAGGGAGAGA TCAGGGCGGA GGCCGAGTCC
ACGACCCGGT TCGGGAAACT GACCGGGATA GAGATGACAA CCGCAGGAAC ATCTGTTTTT
GTCAGACTCT CCTTTGTTAC CGGCGATGCA ATGGGGATGA ATATGGTTAC CATCGCATCA
GCAAAAGCAG CAGATCTTAT CAGCCGGGAG ACCGGGGCAC GCCTTATCGC CCTGTCCGGT
AACTGGTGCA CAGATAAAAA GCCGGCAGCG GTAAACGTTG TCATGGGGAG GGGCAAGACC
GTCAGTGCCG GAGTTTTACT CTCCCAGGAA CTGATAAGCA AGGTATTAAA GACCGATGCA
GCCTCCCTCC TTGAAGTCAA TACCAGAAAG AATCTGGTTG GATCAGCCCG TGCCGGTTCA
TTCGGGTTCA ATGCTCATGC AGCAAATATC ATTGCAGCGA TGTTTATTGC CTGTGGACAG
GATCCTGCCC ATGTGGTGGA GGGATCACTC TGTATAACCA CCGTGGATCC AGCTCATGAG
GGGGTCTATG TTTCGGTCAC ACTCCCGGCT CTTCCAATTG GGACAGTCGG GGGCGGAACC
AGTGTTGAAA CCCAGGCAGA GTGCCTCCGG ATGCTTGGCG TATCCGGCAG TGGTGACCCG
CCCGGCTCAC ATGCCAGAAA GTTAGCAGAG ATCGTTGCAT CTGGTGTTCT TGCCGGAGAA
TTATCCCTCC TTGGAGCACT CGCGGCTCAG CACCTTGCCC GTGCCCACAG TACTCTCGGA
AGATAA
 
Protein sequence
MDEYLRRLRD GTLKLYALEK ELAPADAVSI RRKFIEEETG VPLDRIGDCT ISLDAVVKKN 
CENMIGTIQV PLGVAGPVRI KGEYADGTMY LPLATTEGAL IASVNRGCSL ITAAGGADVR
ILKDGMTRAP VFAADSIVHA KAVCDWIHAH EGEIRAEAES TTRFGKLTGI EMTTAGTSVF
VRLSFVTGDA MGMNMVTIAS AKAADLISRE TGARLIALSG NWCTDKKPAA VNVVMGRGKT
VSAGVLLSQE LISKVLKTDA ASLLEVNTRK NLVGSARAGS FGFNAHAANI IAAMFIACGQ
DPAHVVEGSL CITTVDPAHE GVYVSVTLPA LPIGTVGGGT SVETQAECLR MLGVSGSGDP
PGSHARKLAE IVASGVLAGE LSLLGALAAQ HLARAHSTLG R