Gene Memar_2365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2365 
Symbol 
ID4846210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2351916 
End bp2353124 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content70% 
IMG OID640117075 
Product3-hydroxy-3-methylglutaryl coenzyme A reductase 
Protein accessionYP_001048270 
Protein GI126180305 
COG category[I] Lipid transport and metabolism 
COG ID[COG1257] Hydroxymethylglutaryl-CoA reductase 
TIGRFAM ID[TIGR00533] 3-hydroxy-3-methylglutaryl Coenzyme A reductase, hydroxymethylglutaryl-CoA reductase (NADP) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAGT ATATCGAGAG GCTGAAAGAC GGGTCTCTCA AACTCTACGC GCTCGAGAAG 
GAGCTCCCCC CCGAGGAGGC CGTCCGGGTG CGCCGGGCAT TCGTCGAGGG CGAGACCGGC
GCCGCCCTCC CGAAGGTCGG GTCGTTTTCC ATCGGGCTTG ACCGGGTCGT GAAGCGCAAC
ATCGAGAACA TGATCGGCAC GGTGCAGGTG CCGCTCGGTG TCGCGGGACC GCTCCGGGTG
AAGGGCGAGT ACGCCGACGG GTCCTACTAC CTCCCGCTCG CGACAACCGA AGGGGCGCTC
GTCGCCTCGG TGAACCGCGG CTGCTCGCTC GTCACCCGGG CCGGGGGCGC GGACGTGCGG
ATCATGCGGG ACGGGATGAC CCGGGCGCCG GTCTTCGCCG CCCGGGACGT CGTCCACGCC
CGCGAGGTGG CGGCCTGGGT GGAGAGCCAC GCCGCGGAAG TCCGCGAGGT CGCAGAGAGC
ACCACGAAAC ACGGCGAGTT CCGTGAAGCC GTCACCTACG TTGCCGGGAC AAGCGTCTTC
GTCCGGCTCG AGTTCGACAC CAAGGACGCC ATGGGCATGA ACATGGTGAC GATCGCGGGT
CAGAAGGTCG GCGAACTCAT CGAGCGGGAG ACCGGAGCCC GCCTCGTCGC CACGTCCGGG
AACATGTGCA CCGACAAGAA GCCGGCGGCG ATCAACCTGG TCCGGGGTCG GGGGAAGACC
GTGGTCGCGG GCGTGCGGCT CACCGACGCG GCGATCGTGG ATCTCCTGAA GACCGACGCG
GAGACGCTCA TCGAGGTCAA CTACAGGAAG AACCTTGTGG GCTCGGCCCG GGCGGCCTCG
TTCGGGTTCA ACGCCCACGC GGCAAACGTC GTCGCCGCAA TGTTCATCGC CTGCGGGCAG
GATCCCGCCC ACGTCGTAGA AGGGAGCACC GCGATCACCA CCGTCGACCG GGTGGACGGC
GGGGTCTACG TCTCGGTCAC CCTCCCGTCT CTCCCGGTCG GGACGGTCGG CGGCGGCACG
GGGGTCGACA CCCAGCACGA GTGCCTCGCG ATGCTCGGGG TCGCCGGGGG CGGCGACCCG
CCGGGAACCC ACGCAAAGGC GTTTGCCGAG ATCGTCGCCG CCGGGGTGCT CGCCGGCGAA
CTCTCCCTCC TCGGCGCCCT CGCAGCCCAG CACTTGGCCC GTGCCCACCA GGAGCATGGG
CGGGGGTGA
 
Protein sequence
MDEYIERLKD GSLKLYALEK ELPPEEAVRV RRAFVEGETG AALPKVGSFS IGLDRVVKRN 
IENMIGTVQV PLGVAGPLRV KGEYADGSYY LPLATTEGAL VASVNRGCSL VTRAGGADVR
IMRDGMTRAP VFAARDVVHA REVAAWVESH AAEVREVAES TTKHGEFREA VTYVAGTSVF
VRLEFDTKDA MGMNMVTIAG QKVGELIERE TGARLVATSG NMCTDKKPAA INLVRGRGKT
VVAGVRLTDA AIVDLLKTDA ETLIEVNYRK NLVGSARAAS FGFNAHAANV VAAMFIACGQ
DPAHVVEGST AITTVDRVDG GVYVSVTLPS LPVGTVGGGT GVDTQHECLA MLGVAGGGDP
PGTHAKAFAE IVAAGVLAGE LSLLGALAAQ HLARAHQEHG RG