Gene Tneu_1359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1359 
Symbol 
ID6164655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1212452 
End bp1213639 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content60% 
IMG OID641668514 
Product3-hydroxy-3-methylglutaryl coenzyme A reductase 
Protein accessionYP_001794731 
Protein GI171185812 
COG category[I] Lipid transport and metabolism 
COG ID[COG1257] Hydroxymethylglutaryl-CoA reductase 
TIGRFAM ID[TIGR00533] 3-hydroxy-3-methylglutaryl Coenzyme A reductase, hydroxymethylglutaryl-CoA reductase (NADP) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTTA AGCTTCACGA GTTCGAGAAG ATATACGGCG ACGCCAACAA AGCCGCGGAG 
GCGCGCCGAC AGTACCTGGA GAAGGTCACA GGCGTCAAGC TGGAGAACAT CGGCAAGACC
GTGATAGACC TAAACACGGT GGTGGGCCGC AACATAGAGA ACGTGATTGG CGCGGTGCAG
GTGCCGGTGG GGGTCGCGGG TCCTTTGTTA ATCCACGGCG ATTACGCCCG CGGCCAGTTC
TACATCCCCT TGGCCACCAC CGAGGGCGCT CTGGTGGCCT CGGTAAACAG AGGGGCTAAA
CTCATCACAG AGTCCGGCGG AGCTAGAGCG AAGGTTTTGA GAGACGGCAT GGCTAGAGCC
CCGCTCTTCA GACTCCCCTC TCTCATAGAC GCGGTGGAGT TCGTCCAGTG GATAAACCAG
AACGTGGAAG AAATAAAGAA GGCCGCGGAG TCTACGACGA GCATAGGAAG GCTGAGGGAG
ATACAGCCAT ACGTCGTAGG CAACTACGTG TGGCTTAGGA TGGTTTTCTT CACCGGCGAC
GCCATGGGCA TGAACATGGT CACCATAGCG TCAGACGCCG CCGCGAGATA CATACAGGAG
AGGTTTCCAA AGGCCAAGCT CGTGGCGTTA AGCGGAAACC TCTGCGTAGA CAAGAAGGCC
AACGCGGTGA ACTTCCTCCT GGGGAGGGGG AAGACTGTGG TTGCCGAGGC GGTTATCAAG
AGGGAAATCC TCCAGAGGAT GGGGGTCACG CCTGAGGAGG TGCACGAGGT GAACATCAGG
AAGAATCTGC TGGGCTCGGC GCTGGCGCAC TCCTACGGCT TCAACGCACA TTTCGCGAAC
ATAGTCGCAG CGGTTTTCAT CGCCACCGGC CAAGACGTAG CTCAGGTGGT CGAGTCCAGC
ATGGGCATCA CGTCCACCGA GGCGAGGGAG GAGGGGCTCT ACATCTCCGT CTTTCTACCA
AGCCTGGAGG TGGGCACCGT CGGCGGCGGC ACCAGACTGC CGACGCAGAG GGAGGCCCTG
GAGCTACTCG GCGTCGCTGG CTCGGGAAAC CCGCCGGGCA CCAACGCCCT CAAATTCGCC
GAGATCATCG CGGCGGCGGT GCTCGCCGGC GAGGCAAATC TGCTCATCGC CCTAGCCCGG
AACGAGCTGG CGTCGGCACA CGAGAGACTT GGGAGAGCTA AGAGGTGA
 
Protein sequence
MEVKLHEFEK IYGDANKAAE ARRQYLEKVT GVKLENIGKT VIDLNTVVGR NIENVIGAVQ 
VPVGVAGPLL IHGDYARGQF YIPLATTEGA LVASVNRGAK LITESGGARA KVLRDGMARA
PLFRLPSLID AVEFVQWINQ NVEEIKKAAE STTSIGRLRE IQPYVVGNYV WLRMVFFTGD
AMGMNMVTIA SDAAARYIQE RFPKAKLVAL SGNLCVDKKA NAVNFLLGRG KTVVAEAVIK
REILQRMGVT PEEVHEVNIR KNLLGSALAH SYGFNAHFAN IVAAVFIATG QDVAQVVESS
MGITSTEARE EGLYISVFLP SLEVGTVGGG TRLPTQREAL ELLGVAGSGN PPGTNALKFA
EIIAAAVLAG EANLLIALAR NELASAHERL GRAKR