Gene MADE_03508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03508 
Symbol 
ID6777559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3787686 
End bp3789230 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content46% 
IMG OID642756956 
ProductHydroxymethylglutaryl-coenzyme A reductase 
Protein accessionYP_002127794 
Protein GI196158305 
COG category[I] Lipid transport and metabolism 
COG ID[COG1257] Hydroxymethylglutaryl-CoA reductase 
TIGRFAM ID[TIGR00533] 3-hydroxy-3-methylglutaryl Coenzyme A reductase, hydroxymethylglutaryl-CoA reductase (NADP) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGTAC CCAGTATACT TTTAAAGCAA CTTTATACAC GCGCAAGTCT AACCAAAACA 
GATAAAGGCT TATCTTTCTC TCTTAAAAAT AGATTGAAGG ATGCGACGAT TAAAGAAGTA
AAATGGATAT CACTTGATGG GGAAAAAATT CCCGAAGATA AAATATCCCT TCAATTAACT
GCCGACTCCT GTATTTCTGT CAAAGCGCTA AATCAATCAG ACGGCGAGCC CTTTGGCTTG
CGTCAAACCA TTACCGTACA TTTAGATATC GATGAAGCGC CTTGCCCCGA AAAGCGCAAA
CTGGGTATTT GCTTCTCTGC TTCCCCCTTT GGAAAGTTAA AGTTTGAAGT AGAAGATAAT
ATTACTGCCC CTGGTCAGCG TAGTGCATTT ATCCCTCGAG ATGACATGGA TGACTACGGC
GAAAGCATTA TAAAAACACG CCAAGCGTAT TTTGAAAGCG CTACGGGTAA GAAAATTGAC
CATGTTGGTC AGTACTCCAT TGATCCGAAA GCGCTGCAAG GCAATATTGA GCACTTTATA
GGCGTGGCGC AGGTTCCTAT CGGTATTGCT GGGCCTATAA AAATTAACGG CGAGAATGCA
CAAGGAGAAT TTGTAGTGCC GTTGGCAACG ACCGAGGGTA CGCTGGTGGC ATCCTATAAT
CGAGGTATGA AGCTACTTAA CATGAGTGGG GGGGTAACGG CGACCGTTGT TGACGACGCT
ATGCAGCGAG CCCCTGTATT TATTTTTGAA AATGCTCGGG GCGCAAGAGA TTTCGTGAAA
TGGATAAAAG AGAATTTCGA AAAGATAAAA GAAGAAGCCG AAGCGACATC GAGTGTAGCT
ACGCTTACTT ACATCGATCA TTTTTTATCG AATAAATTCG CTTTTCTGCG GTTTAACTTT
AGAACGGGGG ATGCCGCCGG CCAAAACATG GTGGGACGTG CGACTTTCGC CGCCTGCGGA
TGGATTTTAG ATCACTACGA AGGAATAGAG AATTTCTACC TTGAATCTAA CTTTGCCACC
GATAAAAAAG CCTCACAAAT AAACATAATG CGTACTCGCG GTAAGCGGGT TACTGCCGAG
GCAACCATTA AGCGTGAGCA CTTACTCGAA GTTATGCGGG TCGACCCTAA ACAAATCGAT
TACCACGGGC GTGTTGCCGG CGTGGGTTCG TTCTTGTCCG GTGTGAATAA CACGGGCCTA
CATTCGCCTA ACGGCATCAC TGCCATGTTT ATCGCTACCG GACAGGATGT GGCGAACGTA
TCTGAGTCGT CTGCGGCTAT GATGTATTCT GAGCTTACTG ACGACGGCGA CTTATACGTG
TCTATAACCA TTCCATCACT TATTGTAGCG ACTTATGGCG GCGGTACAGG CATAGGTACG
CAGCGTGAAT GTTTAGAGCT GTTAGACTGT TACGGGCGCG ATCGGGTGTA TAAGTTTGCT
GAAATTGTGG CGTCGGTTGT GCTTGCCGGT GAAATTTCGC TGGCCTCTGC CATTAGCTCA
TCTGACTGGG TGTCATCTCA CGAGCAGTAT GGCCGAAATA GGTAG
 
Protein sequence
MFVPSILLKQ LYTRASLTKT DKGLSFSLKN RLKDATIKEV KWISLDGEKI PEDKISLQLT 
ADSCISVKAL NQSDGEPFGL RQTITVHLDI DEAPCPEKRK LGICFSASPF GKLKFEVEDN
ITAPGQRSAF IPRDDMDDYG ESIIKTRQAY FESATGKKID HVGQYSIDPK ALQGNIEHFI
GVAQVPIGIA GPIKINGENA QGEFVVPLAT TEGTLVASYN RGMKLLNMSG GVTATVVDDA
MQRAPVFIFE NARGARDFVK WIKENFEKIK EEAEATSSVA TLTYIDHFLS NKFAFLRFNF
RTGDAAGQNM VGRATFAACG WILDHYEGIE NFYLESNFAT DKKASQINIM RTRGKRVTAE
ATIKREHLLE VMRVDPKQID YHGRVAGVGS FLSGVNNTGL HSPNGITAMF IATGQDVANV
SESSAAMMYS ELTDDGDLYV SITIPSLIVA TYGGGTGIGT QRECLELLDC YGRDRVYKFA
EIVASVVLAG EISLASAISS SDWVSSHEQY GRNR