Gene Mlab_1655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1655 
Symbol 
ID4795738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1683629 
End bp1684843 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content54% 
IMG OID640100340 
Product3-hydroxy-3-methylglutaryl-coenzyme A reductase 
Protein accessionYP_001031083 
Protein GI124486467 
COG category[I] Lipid transport and metabolism 
COG ID[COG1257] Hydroxymethylglutaryl-CoA reductase 
TIGRFAM ID[TIGR00533] 3-hydroxy-3-methylglutaryl Coenzyme A reductase, hydroxymethylglutaryl-CoA reductase (NADP) 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000342006 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGAAT ATATCTCAAA GATCCGTTCC GGCGATCTGA AACTTTATGC CCTGGAAAAG 
AGTCTGCCGG CAGATGATGC CGTCTCTCTT CGCCGAAAAT ATATCGAAGA GGAGACCGGC
GCGGATCTTT CCGCTGTTGG AACCTATACG ATACCCATCG ACCGCGTAGT GACCAGAAAT
ATCGAGAATA TGATCGGCTG TGTTCAGATC CCGCTTGGGG TTGCGGGACC TCTGACGGTT
AAAGGTGAGT ATGCGAACGG CAGCTTCTGG CTTCCGCTGG CAACGACCGA AGGTGCTTTG
GTCGCTTCAA TCAACAGGGG GTGCAGTGCT ATCACGAAAG CGGGCGGTAC CGAGGTACGT
ATTCTCAGGG ACGGAATGAC CCGTGCTCCT ATTTTTGCGG CGAAAAGCGT GGCCCACGCA
GCCGAGGTTG CCAGATGGGC CGAGGACAAT CTCCTTCTTT TAAAAGTCGC CGCCGAGGAA
ACCACAAACC ACGGCGAGCT GATTGGACTA ACCACGTATA CGGCAGGTAC GAGCGTCTTT
ATCCGCTTTG AGTTCGACAC GAAGGATGCG ATGGGCATGA ACATGGCGAC CATCGCCTCT
GAAGCCGCGG CTCATTTAAT CGAAGAAGAA ACGAAAGCAA AACTTATCGC CGTTTCAGGA
AACATGTGCT GCGACAAAAA ACCCTCCGCG ATCAACATTA TCGAAGGCCG GGGGAAAACG
GTTTCAGCCG GTGTTTTTCT CTCTGATGAA CTTGTATCCA TGGTTTTTAA AACAAACTCG
GCTACCCTTG CCGAGGTCAA CACCCGGAAA AACCTGACAG GTTCTGCCCG GGCGGCCTCC
TTTGGATTCA ATGCCCAGGC AGCGAACGTG GTCGCCGCCA TGTTCATCGC CTGCGGGCAG
GATCCGGCAC ATGTGGTTGA GGGAAGCAAT GCGATCACGA CCGTGGATCT GGTCGAAGGG
GGAGTATATG TCTCGGTTAC GCTTCCCTCG CTTCAGGTCG GAACGATCGG CGGAGGAACG
AGTATTGCCA CCCAGAATGC ATGTCTCTCA ACGCTGGGTG TGGCCGGCGG AGCGGAAAAT
CCGGGAGACA ATGCAAAAGC ATTTGCCGAG ATCGTAGCTT CCGGGGTTCT CGCCGGCGAA
TTGTCGCTTC TTGGAGCACT TGGGGCCCAG CATCTCGGCA AAGCTCACCG GGAACTTGGA
AGGGGCGAAA AGTAA
 
Protein sequence
MDEYISKIRS GDLKLYALEK SLPADDAVSL RRKYIEEETG ADLSAVGTYT IPIDRVVTRN 
IENMIGCVQI PLGVAGPLTV KGEYANGSFW LPLATTEGAL VASINRGCSA ITKAGGTEVR
ILRDGMTRAP IFAAKSVAHA AEVARWAEDN LLLLKVAAEE TTNHGELIGL TTYTAGTSVF
IRFEFDTKDA MGMNMATIAS EAAAHLIEEE TKAKLIAVSG NMCCDKKPSA INIIEGRGKT
VSAGVFLSDE LVSMVFKTNS ATLAEVNTRK NLTGSARAAS FGFNAQAANV VAAMFIACGQ
DPAHVVEGSN AITTVDLVEG GVYVSVTLPS LQVGTIGGGT SIATQNACLS TLGVAGGAEN
PGDNAKAFAE IVASGVLAGE LSLLGALGAQ HLGKAHRELG RGEK