| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1085 |
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| Symbol | |
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| ID | 4909589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1018903 |
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| End bp | 1020102 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640124837 |
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| Product | 3-hydroxy-3-methylglutaryl-coenzyme A reductase |
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| Protein accession | YP_001055976 |
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| Protein GI | 126459698 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1257] Hydroxymethylglutaryl-CoA reductase |
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| TIGRFAM ID | [TIGR00533] 3-hydroxy-3-methylglutaryl Coenzyme A reductase, hydroxymethylglutaryl-CoA reductase (NADP) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGTAA AGCTCCACGA GTTTGAGAAA ATATACGGCG ACGCCAACAA GGCGGCGGAG
GAGCGGAGGA AGTACTTGGA GAGAGTGACC GGGGCCAAGC TTGAGAACAT AGGCAAGACG
ATCATAGACC TAAACACCGT GGTTGGGCGC AACATTGAAA ACGTAATAGG CGCGGTGCAA
GTCCCCGTGG GCGTGGCGGG GCCCCTCCTC GTGAGGGGGG ACTACGCCAA CGGCCACTTC
TACGTACCTC TCGCCACGAC TGAGGGGGCC CTCGTGGCGT CGGTGAACAG GGGGGCCAAG
CTTGTGACAG AGTCGGGCGG GGCTAGGGCC AAGGTGTTGA AGGACGGCAT GGCGAGGGCC
CCCCTCTTCC GCTTGCCCTC CCTCGTGGAG GCGGTGGAGT TCGTAAACTG GGTCCTTCAA
AACTTCGAGG AGGTGAAGAA GGTTGCCGAG TCTACCACTA GGCACGGCAG GCTGAAGGAG
ATTCAGCCCT TCATAGTGGG TAACTACGTC TGGCTGAGGC TTGTCTTCTC CACGGGGGAC
GCCATGGGCA TGAACATGGT CACCGTGGCC TCCGACGCCG TGGCCAAGTA TCTACAGGAG
AAGTTCCCAA ACGCGCGGCT GGTGGCCCTC AGTGGAAACA TGTGTGTTGA CAAGAAGCCA
AACGCCGTGA ACTTCTTGTT GGGCAGAGGC AAGACGGTGG TGGCGGAGGC TGTGGTCAAG
AGGGAGGTTC TGGGGCGGCT GGGGGTAACC CCCGAGGCAG TCCACGAGGT CAACGTGAGA
AAGAACCTCA TGGGATCCGC CTTGGCTCAC TCCTACGGCT TCAACGCCCA CTTCGCAAAC
ATAATTGCGG CTCTGTTTAT AGCCACGGGG CAGGACGTGG CGCAGGTGGT GGAGTCTAGC
ATGGGCATCA CCACCACGGA GCCGAGGGAG GAGGGGCTCT ACATCTCTGT GTTTCTCCCA
AGCCTAGAGG TGGGCACAGT GGGCGGGGGC ACGGGACTGC CCACCCAGAG GGAGGCGCTT
GCGCTATTAG GCGTCGCCGG GCCGGGGGAC CCGCCTGGCA CAAATGCCTT GAAGTTTGCC
GAGATCGCCG CCGCGGCGGT GCTGGCTGGG GAGCTTAACC TGCTGGTGGC TCTCGCTAGA
AATGAGCTTG CCACTGCCCA CGAGCGGCTG GGCCGCGCAA GGCCTCAGGA AAGGGCTTGA
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| Protein sequence | MEVKLHEFEK IYGDANKAAE ERRKYLERVT GAKLENIGKT IIDLNTVVGR NIENVIGAVQ
VPVGVAGPLL VRGDYANGHF YVPLATTEGA LVASVNRGAK LVTESGGARA KVLKDGMARA
PLFRLPSLVE AVEFVNWVLQ NFEEVKKVAE STTRHGRLKE IQPFIVGNYV WLRLVFSTGD
AMGMNMVTVA SDAVAKYLQE KFPNARLVAL SGNMCVDKKP NAVNFLLGRG KTVVAEAVVK
REVLGRLGVT PEAVHEVNVR KNLMGSALAH SYGFNAHFAN IIAALFIATG QDVAQVVESS
MGITTTEPRE EGLYISVFLP SLEVGTVGGG TGLPTQREAL ALLGVAGPGD PPGTNALKFA
EIAAAAVLAG ELNLLVALAR NELATAHERL GRARPQERA
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