More than 300 homologs were found in PanDaTox collection
for query gene BamMC406_4680 on replicon NC_010552
Organism: Burkholderia ambifaria MC40-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010552  BamMC406_4680  binding-protein-dependent transport systems inner membrane component  100 
 
 
286 aa  553  1e-156  Burkholderia ambifaria MC40-6  Bacteria  normal  0.547032  normal 
 
 
-
 
NC_008391  Bamb_4156  binding-protein-dependent transport systems inner membrane component  94.76 
 
 
286 aa  468  1.0000000000000001e-131  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0941  ABC sugar transporter, inner membrane subunit  96.15 
 
 
295 aa  452  1.0000000000000001e-126  Burkholderia sp. 383  Bacteria  normal  normal  0.306384 
 
 
-
 
NC_010515  Bcenmc03_5510  binding-protein-dependent transport systems inner membrane component  93.71 
 
 
286 aa  447  1.0000000000000001e-124  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.43549  normal 
 
 
-
 
NC_008061  Bcen_3594  binding-protein-dependent transport systems inner membrane component  94.41 
 
 
286 aa  444  1.0000000000000001e-124  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4773  binding-protein-dependent transport systems inner membrane component  94.41 
 
 
286 aa  444  1.0000000000000001e-124  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.800108 
 
 
-
 
NC_012912  Dd1591_3242  binding-protein-dependent transport systems inner membrane component  60.85 
 
 
275 aa  270  2e-71  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3170  binding-protein-dependent transport systems inner membrane component  58.33 
 
 
275 aa  248  6e-65  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0399  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
286 aa  176  5e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_1418  binding-protein-dependent transport systems inner membrane component  38.93 
 
 
276 aa  174  9.999999999999999e-43  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4865  binding-protein-dependent transport systems inner membrane component  36.53 
 
 
296 aa  167  2e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.174421 
 
 
-
 
NC_011369  Rleg2_3667  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
296 aa  166  5e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2303  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
275 aa  165  1.0000000000000001e-39  Chelativorans sp. BNC1  Bacteria  normal  0.313337  n/a   
 
 
-
 
NC_011899  Hore_04600  binding-protein-dependent transport systems inner membrane component  35.41 
 
 
277 aa  164  1.0000000000000001e-39  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_4088  binding-protein-dependent transport systems inner membrane component  35.82 
 
 
275 aa  164  2.0000000000000002e-39  Jannaschia sp. CCS1  Bacteria  normal  normal  0.350213 
 
 
-
 
NC_008243  Meso_4515  binding-protein-dependent transport systems inner membrane component  35.83 
 
 
275 aa  164  2.0000000000000002e-39  Chelativorans sp. BNC1  Bacteria  normal  0.275064  n/a   
 
 
-
 
NC_010003  Pmob_0029  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
283 aa  163  3e-39  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000511748  n/a   
 
 
-
 
NC_012669  Bcav_1682  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
275 aa  162  4.0000000000000004e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.299262  normal 
 
 
-
 
NC_011830  Dhaf_2632  binding-protein-dependent transport systems inner membrane component  36.23 
 
 
281 aa  162  6e-39  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0395  binding-protein-dependent transport systems inner membrane component  35.55 
 
 
277 aa  162  6e-39  Thermoanaerobacter sp. X514  Bacteria  normal  0.230637  n/a   
 
 
-
 
NC_009486  Tpet_0956  binding-protein-dependent transport systems inner membrane component  35.43 
 
 
278 aa  159  4e-38  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0972  binding-protein-dependent transport systems inner membrane component  35.43 
 
 
278 aa  159  4e-38  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00136246  n/a   
 
 
-
 
NC_009718  Fnod_0448  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
281 aa  158  1e-37  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1818  binding-protein-dependent transport systems inner membrane component  33.86 
 
 
279 aa  158  1e-37  Thermosipho melanesiensis BI429  Bacteria  normal  0.675174  n/a   
 
 
-
 
NC_009952  Dshi_3142  sugar ABC transporter  34.91 
 
 
275 aa  157  2e-37  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.367291  normal 
 
 
-
 
NC_011661  Dtur_1741  binding-protein-dependent transport systems inner membrane component  34.31 
 
 
281 aa  155  5.0000000000000005e-37  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2088  binding-protein-dependent transport systems inner membrane component  35 
 
 
282 aa  155  6e-37  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.00655693  normal  0.897951 
 
 
-
 
NC_013172  Bfae_25430  carbohydrate ABC transporter membrane protein  39 
 
 
275 aa  155  9e-37  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0542318  n/a   
 
 
-
 
NC_013595  Sros_2192  putative sugar ABC transporter, permease protein  35.16 
 
 
283 aa  154  1e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5701  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
278 aa  154  2e-36  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0280  ABC transporter, inner membrane subunit  36.23 
 
 
280 aa  154  2e-36  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.787211  n/a   
 
 
-
 
NC_014165  Tbis_1103  binding-protein-dependent transporter inner membrane component  35.54 
 
 
283 aa  154  2e-36  Thermobispora bispora DSM 43833  Bacteria  normal  0.216355  normal  0.105298 
 
 
-
 
NC_012791  Vapar_3350  binding-protein-dependent transport systems inner membrane component  40.36 
 
 
274 aa  153  4e-36  Variovorax paradoxus S110  Bacteria  normal  0.610127  n/a   
 
 
-
 
NC_012669  Bcav_3714  binding-protein-dependent transport systems inner membrane component  37.4 
 
 
294 aa  152  5e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.273471 
 
 
-
 
NC_009667  Oant_0352  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
277 aa  152  7e-36  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0307  binding-protein-dependent transport systems inner membrane component  33.98 
 
 
274 aa  151  1e-35  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1260  binding-protein-dependent transport systems inner membrane component  36.5 
 
 
291 aa  151  1e-35  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4059  binding-protein-dependent transport systems inner membrane component  34.73 
 
 
281 aa  150  2e-35  Burkholderia phymatum STM815  Bacteria  normal  0.965906  normal  0.767737 
 
 
-
 
NC_007948  Bpro_0701  binding-protein-dependent transport systems inner membrane component  40.89 
 
 
315 aa  150  2e-35  Polaromonas sp. JS666  Bacteria  normal  0.338666  normal 
 
 
-
 
NC_012848  Rleg_4709  binding-protein-dependent transport systems inner membrane component  37.12 
 
 
278 aa  150  2e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0050  binding-protein-dependent transport systems inner membrane component  33.09 
 
 
305 aa  150  2e-35  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3334  binding-protein-dependent transport systems inner membrane component  38.5 
 
 
299 aa  150  3e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2612  binding-protein-dependent transport systems inner membrane component  39.37 
 
 
276 aa  149  4e-35  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_00800  binding-protein-dependent transport systems inner membrane component  37.93 
 
 
280 aa  149  4e-35  Halothermothrix orenii H 168  Bacteria  normal  0.303025  n/a   
 
 
-
 
NC_009486  Tpet_0644  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
283 aa  149  5e-35  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000450076  n/a   
 
 
-
 
NC_010483  TRQ2_0669  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
283 aa  149  6e-35  Thermotoga sp. RQ2  Bacteria  normal  0.586722  n/a   
 
 
-
 
NC_014210  Ndas_0657  binding-protein-dependent transport systems inner membrane component  36.98 
 
 
322 aa  149  6e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.171707  normal  0.684803 
 
 
-
 
NC_010676  Bphyt_7206  binding-protein-dependent transport systems inner membrane component  34.35 
 
 
283 aa  148  1.0000000000000001e-34  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3685  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
299 aa  148  1.0000000000000001e-34  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3773  binding-protein-dependent transport systems inner membrane component  36.1 
 
 
279 aa  148  1.0000000000000001e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.468941  normal 
 
 
-
 
NC_004311  BRA0306  sugar ABC transporter, permease protein  37.93 
 
 
275 aa  147  2.0000000000000003e-34  Brucella suis 1330  Bacteria  normal  0.147324  n/a   
 
 
-
 
NC_007952  Bxe_B0418  ABC sugar transporter, inner membrane subunit  33.97 
 
 
283 aa  147  2.0000000000000003e-34  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2422  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
277 aa  147  2.0000000000000003e-34  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.161716 
 
 
-
 
NC_009921  Franean1_7051  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
279 aa  147  3e-34  Frankia sp. EAN1pec  Bacteria  normal  0.305839  normal 
 
 
-
 
NC_009620  Smed_4330  binding-protein-dependent transport systems inner membrane component  32.43 
 
 
299 aa  146  3e-34  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0255144 
 
 
-
 
NC_011886  Achl_2899  binding-protein-dependent transport systems inner membrane component  32.35 
 
 
316 aa  146  4.0000000000000006e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011368  Rleg2_4976  binding-protein-dependent transport systems inner membrane component  35.61 
 
 
273 aa  145  7.0000000000000006e-34  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.12262  normal 
 
 
-
 
NC_013530  Xcel_2795  binding-protein-dependent transport systems inner membrane component  36.19 
 
 
298 aa  145  7.0000000000000006e-34  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1500  binding-protein-dependent transport systems inner membrane component  37.15 
 
 
293 aa  145  7.0000000000000006e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.347509  normal  0.943286 
 
 
-
 
NC_009668  Oant_2942  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
275 aa  145  8.000000000000001e-34  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.667129  n/a   
 
 
-
 
NC_010625  Bphy_6369  binding-protein-dependent transport systems inner membrane component  40.39 
 
 
317 aa  145  9e-34  Burkholderia phymatum STM815  Bacteria  normal  0.568723  normal 
 
 
-
 
NC_013521  Sked_02950  carbohydrate ABC transporter membrane protein  30.14 
 
 
297 aa  144  2e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3556  putative ABC transporter permease protein  35.11 
 
 
302 aa  144  2e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0448  binding-protein-dependent transport systems inner membrane component  39.11 
 
 
277 aa  144  2e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2144  binding-protein-dependent transport systems inner membrane component  34.24 
 
 
288 aa  144  2e-33  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011366  Rleg2_5850  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
276 aa  143  3e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.590535  normal 
 
 
-
 
NC_009620  Smed_3810  binding-protein-dependent transport systems inner membrane component  37.19 
 
 
276 aa  142  4e-33  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3322  binding-protein-dependent transport systems inner membrane component  33.69 
 
 
309 aa  142  5e-33  Arthrobacter sp. FB24  Bacteria  normal  0.0903437  n/a   
 
 
-
 
NC_013093  Amir_0401  binding-protein-dependent transport systems inner membrane component  37.2 
 
 
273 aa  142  6e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0589  binding-protein-dependent transport systems inner membrane component  34.08 
 
 
283 aa  142  6e-33  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.288724  normal 
 
 
-
 
NC_013595  Sros_7723  binding-protein-dependent transport systems inner membrane component  36.78 
 
 
279 aa  142  6e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4942  binding-protein-dependent transport systems inner membrane component  32.73 
 
 
277 aa  142  6e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6763  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
276 aa  142  6e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.18605  normal 
 
 
-
 
NC_009504  BOV_A0700  putative sugar ABC transporter, permease protein  33.46 
 
 
275 aa  142  6e-33  Brucella ovis ATCC 25840  Bacteria  normal  0.480284  n/a   
 
 
-
 
NC_007494  RSP_3672  ABC sugar transporter, inner membrane subunit  32.95 
 
 
277 aa  142  7e-33  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.191343  n/a   
 
 
-
 
NC_009636  Smed_2907  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
274 aa  142  8e-33  Sinorhizobium medicae WSM419  Bacteria  normal  0.395793  normal 
 
 
-
 
NC_007347  Reut_A2206  binding-protein dependent transport system inner membrane protein  33.33 
 
 
273 aa  142  8e-33  Ralstonia eutropha JMP134  Bacteria  normal  0.91702  n/a   
 
 
-
 
NC_010676  Bphyt_5636  binding-protein-dependent transport systems inner membrane component  39.9 
 
 
317 aa  142  8e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  0.330167  normal 
 
 
-
 
NC_009050  Rsph17029_3407  binding-protein-dependent transport systems inner membrane component  32.95 
 
 
277 aa  142  8e-33  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.353789  normal  0.790416 
 
 
-
 
NC_004311  BRA0750  sugar ABC transporter, permease protein, putative  33.46 
 
 
275 aa  141  9.999999999999999e-33  Brucella suis 1330  Bacteria  normal  0.688885  n/a   
 
 
-
 
NC_014158  Tpau_1201  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
277 aa  141  9.999999999999999e-33  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2890  binding-protein-dependent transport systems inner membrane component  32.24 
 
 
312 aa  141  9.999999999999999e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.908761  normal  0.323454 
 
 
-
 
NC_007802  Jann_3555  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
279 aa  141  9.999999999999999e-33  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_011366  Rleg2_5715  binding-protein-dependent transport systems inner membrane component  32.82 
 
 
311 aa  141  9.999999999999999e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.578248 
 
 
-
 
NC_008541  Arth_3148  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
311 aa  141  9.999999999999999e-33  Arthrobacter sp. FB24  Bacteria  decreased coverage  0.00417428  n/a   
 
 
-
 
NC_008578  Acel_0554  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
296 aa  141  9.999999999999999e-33  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2292  binding-protein-dependent transport systems inner membrane component  45.58 
 
 
286 aa  141  9.999999999999999e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.277905  normal 
 
 
-
 
NC_009654  Mmwyl1_0023  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
277 aa  141  9.999999999999999e-33  Marinomonas sp. MWYL1  Bacteria  normal  0.275556  normal  0.424969 
 
 
-
 
NC_011899  Hore_03310  binding-protein-dependent transport systems inner membrane component  30.31 
 
 
288 aa  141  9.999999999999999e-33  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3897  binding-protein-dependent transport systems inner membrane component  32.36 
 
 
275 aa  140  1.9999999999999998e-32  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.965768  n/a   
 
 
-
 
NC_009484  Acry_0461  binding-protein-dependent transport systems inner membrane component  36.54 
 
 
273 aa  140  1.9999999999999998e-32  Acidiphilium cryptum JF-5  Bacteria  normal  0.136412  n/a   
 
 
-
 
NC_008010  Dgeo_2818  binding-protein-dependent transport systems inner membrane component  32.69 
 
 
255 aa  140  1.9999999999999998e-32  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2868  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
284 aa  140  1.9999999999999998e-32  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4355  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
289 aa  140  1.9999999999999998e-32  Mycobacterium sp. MCS  Bacteria  normal  0.023138  n/a   
 
 
-
 
NC_008705  Mkms_4441  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
289 aa  140  1.9999999999999998e-32  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0617645 
 
 
-
 
NC_012853  Rleg_5696  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
283 aa  140  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.697019  normal  0.0828938 
 
 
-
 
NC_009077  Mjls_4735  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
289 aa  140  1.9999999999999998e-32  Mycobacterium sp. JLS  Bacteria  normal  0.820737  normal 
 
 
-
 
NC_009429  Rsph17025_3649  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
281 aa  140  3e-32  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0384109 
 
 
-
 
NC_013411  GYMC61_2957  binding-protein-dependent transport systems inner membrane component  34.9 
 
 
275 aa  140  3e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008390  Bamb_2641  binding-protein-dependent transport systems inner membrane component  36.79 
 
 
283 aa  139  3.9999999999999997e-32  Burkholderia ambifaria AMMD  Bacteria  normal  0.0200189  n/a   
 
 
-
 
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