Gene Bcen2424_4773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4773 
Symbol 
ID4453441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1758115 
End bp1758975 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content68% 
IMG OID639696829 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_838400 
Protein GI116692867 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.800108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGC GATCGGCAGG TATCCCGCGC ATCCGCACGG GCGTCGCGTT TAGTCACGCG 
ATGCCGTGGG CGCTGCGCAT CGTCGCGCTC GCACTGTTGC TGCTGCCGTG CCTGTGGATG
GTCGGCGCGG CCTTCATGCC GACGCTAGAA CGCCTCGATC ATCCGTTGCG GATCTGGCCG
GCCGCGCCGA CCTTCGAGCA TTTCGCGTCG GTGTGGGCGA ACGGGATCGG CGCGCCGCTG
TTCAATTCGC TGCTGGTCGG CTTCGGCACG ACGCTGCTCG CGCTGGCGCT CGCGTTCCCG
GCCGCGTACG CGCTCGTGCG GCTGCGGTTT CCGGCGCGGC TCGACCTGCT GTTCCTGGTG
CTCGTGCTGG CGCTGAAGCT GATGCCGCCG ATCACGATCG CGGTGCCGCT GTTCGCGCTC
GCGAAGCGGC TGCACCTGCT CGATTCGACG CTCGGCCTGA TGCTCGCGTA TCAGATCTAC
GCATTGCCGA TGGCGATCTG GATGCTGCTG GCGTTCGTGC GCGACGTGCC GATCGAATAT
GAGGAAGCGG CGTGCATCGA CGGCGCGGGG CTCGCGCGGC GGCTCGTGCA GATCGTGCTG
CCGCTGTGCG CGCCGGGGCT GATCGCGACC GCGATCTTCG TGTTCATCGC CGCATGGAAC
GAATTCCTGA TCGCGCTGCT GTTCGTGTCG ACGCCGAGCC GCTTCACGCT GCCGCTCGCG
ATTGCCGGCT ACGTGACGGA GAACGGCATC GACTGGGGCG ACTTGATGAG CGCCGGGCTG
ATGGCGTCGC TGCCGACGCT GGCCGTGGCC GGCTATGTGC AGCGCTACCT GTTGCGCGGC
TTCGCGGGCG GGCTGAAGTG A
 
Protein sequence
MTARSAGIPR IRTGVAFSHA MPWALRIVAL ALLLLPCLWM VGAAFMPTLE RLDHPLRIWP 
AAPTFEHFAS VWANGIGAPL FNSLLVGFGT TLLALALAFP AAYALVRLRF PARLDLLFLV
LVLALKLMPP ITIAVPLFAL AKRLHLLDST LGLMLAYQIY ALPMAIWMLL AFVRDVPIEY
EEAACIDGAG LARRLVQIVL PLCAPGLIAT AIFVFIAAWN EFLIALLFVS TPSRFTLPLA
IAGYVTENGI DWGDLMSAGL MASLPTLAVA GYVQRYLLRG FAGGLK