| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5636 |
|---|
| Symbol | |
|---|
| ID | 6278518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 1839554 |
|---|
| End bp | 1840507 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642616710 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001889353 |
|---|
| Protein GI | 187920322 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.330167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACCTA CGGCTACCCA ACACTCGGTG GTGGCGTCGT CGCCGCGCGG CAAGCGCTTC
GCGGCGGCGG TTGTCATCAC TTACGCGCTG CTCGCAACCT TGCCGATGGT GTGGATCTTC
CTGACGAGTT TCAAGACGCA GGAGGACGCG ATTGCCTATC CGCCTGTCGT GCTGTTTCAG
CCGTCGATGG AAGGCTATGT GAACCTGTTC ACGATTCGTT CGCGGCAGAC GCCCGAGTTC
ATCGCCAGTC TGCCGCCCGC GCGGACCTGG TATGAGCGTG ATGTGCGCAA GCGCAACATG
GTCATCGCTG GGCCCTCGAA GGTCCTGCCG CGCTTCGCGA ATTCGCTCGT GATCGGTTTC
GGTTCGACCT TTCTCGCAGT GTTTCTCGGT ACGTTGGCGG CTTATGCGTT CTCGCGTTTC
AAGGTGCCGC TCGCCGACGA CCTGCTTTTC TTCATCCTGT CGACGCGCAT GATGCCGCCG
ATCGCGGTCG CCATCCCGAT CTACCTGATG TATCGGGCAC TGGGCCTGAG CGACAGCTGT
GTCGGCATGA TCGTGCTGTA TACGGCGGTG AACGTATCGC TGGCGGTATG GCTGCTGAAG
GGGTTCATGG ACGAGATCCC GCGCGAATAC GAGGAGGCGG CGCTCGTCGA TGGCTATACG
CGCCTGCAGG CCTTCGTCAA GGTGGTGCTG CCGCAGGCGA TCACCGGCAT TGCCGCGACC
GCGATTTTCT GCCTGATCTT CGCGTGGAAC GAGTACGCGT TCGCGTCGCT GCTGACAAGC
GGCGATGCGC AGACCATGCC GCCGTTCATT CCGTTCATCA TCGGCGAAGG CGGGCAGGAT
TGGCCGGCCG TCGCGGCGGC GACGACGCTT TTCGTGCTGC CTATCCTTAT CTTCACTGTG
GTGCTGCGCA AACATTTGTT GCGCGGCATC ACCTTCGGAG CGGTGCGCAA ATGA
|
|---|
| Protein sequence | MRPTATQHSV VASSPRGKRF AAAVVITYAL LATLPMVWIF LTSFKTQEDA IAYPPVVLFQ
PSMEGYVNLF TIRSRQTPEF IASLPPARTW YERDVRKRNM VIAGPSKVLP RFANSLVIGF
GSTFLAVFLG TLAAYAFSRF KVPLADDLLF FILSTRMMPP IAVAIPIYLM YRALGLSDSC
VGMIVLYTAV NVSLAVWLLK GFMDEIPREY EEAALVDGYT RLQAFVKVVL PQAITGIAAT
AIFCLIFAWN EYAFASLLTS GDAQTMPPFI PFIIGEGGQD WPAVAAATTL FVLPILIFTV
VLRKHLLRGI TFGAVRK
|
|---|
| |