| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0461 |
|---|
| Symbol | |
|---|
| ID | 5162366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 513627 |
|---|
| End bp | 514448 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640552377 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001233604 |
|---|
| Protein GI | 148259477 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.136412 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAT CCCTCTCCAG CCGCGTTGTC CTCGCCATCC TCGCCTGGGC GGCCGCGTTC
ATCATGTTCT TCCCGATCCT CTGGATGCTC GTCACCGCCT TCAAGACCGA AGGCCAAGCC
ATCGCGATTC CCCCGCTGCT CATCTTCACG CCCACGCTCA AGAGCTTCTT CGATGCAACG
CAGAATGCCG GCTACCTGCT CTTCGCGCTG AACAGCGTGA TCGTCAGCGT CGGCTCCACC
GTGCTTGCCA TCGCCATCGC CTTTCCCGCT GCCTACGCGC TCGCCTTCTT CCCTGGCAAG
CGCACGGAAT TTACCCTGAT GTGGATGCTC TCGACCAAGA TGCTCCCGGC GGTTGGCGTG
CTCATGCCCA TCTATCTCTT CCTCAAGAAC GTCCACCTGC TCGACACGCG GCTCGGCCTC
GTCGGCATCG ACACGCTGAT GAATCTGCCC ATCGTGGTCT GGATGCTCTA CTCGTTCTTC
AAGGATATTC CTCACGAAAT TCTCGAAGCC GCGCGCGTCG ATGGCGTTGG CCCGCGCCAG
CAGATGATCC ATCTGCTGCT CCCGCTCGCG GGTCCCGGCG TGGCCTCCAC GGCGCTGCTC
TCGGTCATCC TCGCCTGGAA CGAGGCGTTC TGGAGCATCA ACGTCACCGC CTCCCATGCC
GGAACGCTCG CCGCCTATAT CGCGCGGTTC TCGGCGCCGG AGGGATTGTT CTGGGCGAAA
CTCTCGGCGG CCTCGGTTCT CGCGGTCGCC CCCATTCTGG TCTTCGGCAG CCTGACCCAG
CGCCGCCTCG TGCGCGGGCT CACATTCGGC GCGGTGAAAT AG
|
|---|
| Protein sequence | MKPSLSSRVV LAILAWAAAF IMFFPILWML VTAFKTEGQA IAIPPLLIFT PTLKSFFDAT
QNAGYLLFAL NSVIVSVGST VLAIAIAFPA AYALAFFPGK RTEFTLMWML STKMLPAVGV
LMPIYLFLKN VHLLDTRLGL VGIDTLMNLP IVVWMLYSFF KDIPHEILEA ARVDGVGPRQ
QMIHLLLPLA GPGVASTALL SVILAWNEAF WSINVTASHA GTLAAYIARF SAPEGLFWAK
LSAASVLAVA PILVFGSLTQ RRLVRGLTFG AVK
|
|---|
| |