Gene Dd703_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3170 
Symbol 
ID8088467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3720976 
End bp3721803 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content62% 
IMG OID644837244 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002988756 
Protein GI242240575 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGC CGCTCTGGTT GTCCTGGCTG CGCGCCGCCG CACTCGCTCT AGCATTGTTG 
TTTTTTACGC TGCCGATTCT GTGGATGCTG GCCGCCGCCT TCAAATCCGG CGCTGAATTC
TCCAGCCTGG CGAGCCCGTT CTGGCCGCAG CAGTGGACGC TCGACGCCCT GCGCAACCTG
TTGGCGAACG GCGCCTTAGC CCGGCTGCGC AATACATTGC TGGTGGCCGC CGGTGCAACG
GCGCTATCGC TGTTAACGGG CTTTCTCGCC GCCTATACGC TGGCGCGCCA CCGCTTTCCC
GCCCGGCTGG ACGTTTTTTT CCTGCTGCTG GTGTTGCTGG TCAAGATGAT GCCGCCGATG
GTGGTGGCCA TCCCGCTTTA CTCGTTGCTC AAAGCGCTGC ATCTGCTCAA CAGCCTGGCC
GGGCTGATGC TGGCGTATCA GGTCTATACC CTGCCGTTCT GCATCTGGAT GTTGCTGAGT
TTTGTGCGCG ATATGCCGCT CGCGCTGGAA GAGGCGGCGG CGATGGACGG CGCTCGCCTG
TGGCAACGCC TGCGTTATGT CGTGCTGCCG GTCTGCGCTC CCGGCCTGGT GGCGACGGCG
ATCTTTACGC TGATCGTCGC CTGGAACGAA TTCCTGTTCG CCCTGCTGTA TCTGCAAACC
CCGCAGCAGT TCACGCTGCC GCTGTTCATC GCCAACTTTA TGACCGAAAA CCAGACCTAC
TGGGGCGAGC TGATGGGGAT CGGGCTGCTG TCGTCGCTGC CGGTGCTGCT GGTGGCGGGA
TACATTCAAC GTTATTTGCT GCGCGGCTTT GCCGCCGGCC AGAAATAG
 
Protein sequence
MKLPLWLSWL RAAALALALL FFTLPILWML AAAFKSGAEF SSLASPFWPQ QWTLDALRNL 
LANGALARLR NTLLVAAGAT ALSLLTGFLA AYTLARHRFP ARLDVFFLLL VLLVKMMPPM
VVAIPLYSLL KALHLLNSLA GLMLAYQVYT LPFCIWMLLS FVRDMPLALE EAAAMDGARL
WQRLRYVVLP VCAPGLVATA IFTLIVAWNE FLFALLYLQT PQQFTLPLFI ANFMTENQTY
WGELMGIGLL SSLPVLLVAG YIQRYLLRGF AAGQK