More than 300 homologs were found in PanDaTox collection
for query gene Arth_0358 on replicon NC_008541
Organism: Arthrobacter sp. FB24



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008541  Arth_0358  short-chain dehydrogenase/reductase SDR  100 
 
 
244 aa  487  1e-137  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0572  short-chain dehydrogenase/reductase SDR  83.84 
 
 
233 aa  374  1e-103  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.378892 
 
 
-
 
NC_014210  Ndas_1576  short-chain dehydrogenase/reductase SDR  59.29 
 
 
228 aa  264  8.999999999999999e-70  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.126746  normal  0.0331408 
 
 
-
 
NC_013159  Svir_11220  short-chain alcohol dehydrogenase  59.03 
 
 
228 aa  258  7e-68  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.266926  normal  0.0891771 
 
 
-
 
NC_014165  Tbis_2638  short-chain dehydrogenase/reductase SDR  60.43 
 
 
226 aa  257  1e-67  Thermobispora bispora DSM 43833  Bacteria  normal  0.820451  normal 
 
 
-
 
NC_009380  Strop_1765  short-chain dehydrogenase/reductase SDR  58.74 
 
 
228 aa  238  8e-62  Salinispora tropica CNB-440  Bacteria  normal  0.316693  normal 
 
 
-
 
NC_009953  Sare_1751  short-chain dehydrogenase/reductase SDR  60.09 
 
 
228 aa  236  2e-61  Salinispora arenicola CNS-205  Bacteria  normal  0.546455  normal  0.0252513 
 
 
-
 
NC_008392  Bamb_5653  short-chain dehydrogenase/reductase SDR  39.92 
 
 
251 aa  158  6e-38  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.383425 
 
 
-
 
NC_008544  Bcen2424_6443  short-chain dehydrogenase/reductase SDR  41.46 
 
 
259 aa  158  8e-38  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0150364  normal 
 
 
-
 
NC_008060  Bcen_1386  short-chain dehydrogenase/reductase SDR  41.46 
 
 
251 aa  158  9e-38  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010557  BamMC406_6401  short-chain dehydrogenase/reductase SDR  40.48 
 
 
249 aa  158  9e-38  Burkholderia ambifaria MC40-6  Bacteria  normal  0.476786  normal  0.058074 
 
 
-
 
NC_010512  Bcenmc03_6034  short-chain dehydrogenase/reductase SDR  41.46 
 
 
249 aa  158  9e-38  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.311099  normal  0.357873 
 
 
-
 
NC_010087  Bmul_5439  short-chain dehydrogenase/reductase SDR  40.5 
 
 
249 aa  154  1e-36  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.012898 
 
 
-
 
NC_009079  BMA10247_A2278  short chain dehydrogenase/reductase family oxidoreductase  40.71 
 
 
251 aa  149  3e-35  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA1991  short chain dehydrogenase/reductase family oxidoreductase  40.71 
 
 
251 aa  149  3e-35  Burkholderia mallei ATCC 23344  Bacteria  normal  0.371693  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1390  short chain dehydrogenase/reductase family oxidoreductase  40.71 
 
 
251 aa  149  3e-35  Burkholderia pseudomallei 1710b  Bacteria  normal  0.399104  n/a   
 
 
-
 
NC_008835  BMA10229_1302  short chain dehydrogenase/reductase family oxidoreductase  40.71 
 
 
251 aa  149  3e-35  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1014  short chain dehydrogenase/reductase family oxidoreductase  40.71 
 
 
251 aa  149  3e-35  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3043  short chain dehydrogenase/reductase family oxidoreductase  40.71 
 
 
251 aa  149  3e-35  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A3172  short chain dehydrogenase/reductase family oxidoreductase  40.71 
 
 
251 aa  149  3e-35  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4388  Short-chain dehydrogenase/reductase SDR  39.83 
 
 
249 aa  143  2e-33  Ralstonia eutropha JMP134  Bacteria  normal  0.520799  n/a   
 
 
-
 
NC_011884  Cyan7425_3728  short-chain dehydrogenase/reductase SDR  36.17 
 
 
241 aa  137  1e-31  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A1794  Short-chain dehydrogenase/reductase SDR  38.14 
 
 
238 aa  136  3.0000000000000003e-31  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_3804  short-chain dehydrogenase/reductase SDR  37.71 
 
 
271 aa  132  6e-30  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4881  short-chain dehydrogenase/reductase SDR  37.71 
 
 
271 aa  132  6e-30  Ralstonia pickettii 12J  Bacteria  normal  0.169206  normal  0.0484523 
 
 
-
 
NC_008148  Rxyl_0706  short-chain dehydrogenase/reductase SDR  39.83 
 
 
242 aa  130  2.0000000000000002e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  hitchhiker  0.00246779  n/a   
 
 
-
 
NC_013525  Tter_0152  short-chain dehydrogenase/reductase SDR  38.82 
 
 
247 aa  129  5.0000000000000004e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007404  Tbd_0734  putative short chain dehydrogenase  39.79 
 
 
242 aa  125  5e-28  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.491859  normal 
 
 
-
 
NC_008688  Pden_5052  short-chain dehydrogenase/reductase SDR  39.09 
 
 
246 aa  114  2.0000000000000002e-24  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1337  3-ketoacyl-(acyl-carrier-protein) reductase  34.82 
 
 
238 aa  108  5e-23  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.541378  normal 
 
 
-
 
NC_013205  Aaci_2186  3-ketoacyl-(acyl-carrier-protein) reductase  32.72 
 
 
241 aa  109  5e-23  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2505  short-chain dehydrogenase/reductase SDR  30.8 
 
 
231 aa  107  2e-22  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2555  short-chain dehydrogenase/reductase SDR  30.8 
 
 
231 aa  107  2e-22  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.459049  n/a   
 
 
-
 
NC_013440  Hoch_4887  short-chain dehydrogenase/reductase SDR  35.47 
 
 
264 aa  106  3e-22  Haliangium ochraceum DSM 14365  Bacteria  normal  0.845571  normal  0.46236 
 
 
-
 
NC_008025  Dgeo_0818  short chain dehydrogenase  32.77 
 
 
242 aa  105  8e-22  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  30.32 
 
 
264 aa  105  1e-21  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0562  short-chain dehydrogenase/reductase SDR  38.5 
 
 
263 aa  104  1e-21  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4381  short-chain dehydrogenase/reductase SDR  30.54 
 
 
248 aa  104  1e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.297747  hitchhiker  0.00314525 
 
 
-
 
NC_013457  VEA_000420  oxidoreductase short-chain dehydrogenase/reductase family  29.2 
 
 
239 aa  104  1e-21  Vibrio sp. Ex25  Bacteria  normal  0.637186  n/a   
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  34.21 
 
 
236 aa  103  2e-21  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_009483  Gura_0251  short-chain dehydrogenase/reductase SDR  36.84 
 
 
255 aa  103  2e-21  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  28.96 
 
 
264 aa  102  4e-21  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_009007  RSP_3888  Short-chain dehydrogenase/reductase SDR  36.32 
 
 
248 aa  103  4e-21  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.689066  n/a   
 
 
-
 
NC_009040  Rsph17029_4152  short-chain dehydrogenase/reductase SDR  37.81 
 
 
248 aa  102  5e-21  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.883232 
 
 
-
 
NC_009338  Mflv_2501  short-chain dehydrogenase/reductase SDR  35.87 
 
 
233 aa  102  5e-21  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2147  3-ketoacyl-(acyl-carrier-protein) reductase  33.19 
 
 
253 aa  102  5e-21  Geobacter bemidjiensis Bem  Bacteria  normal  0.760058  n/a   
 
 
-
 
NC_013730  Slin_0457  short-chain dehydrogenase/reductase SDR  33.5 
 
 
238 aa  102  7e-21  Spirosoma linguale DSM 74  Bacteria  normal  0.644121  normal 
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  28.96 
 
 
264 aa  101  1e-20  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_4068  short chain dehydrogenase  38.67 
 
 
257 aa  100  1e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.625011  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  28.96 
 
 
264 aa  101  1e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  28.96 
 
 
264 aa  101  1e-20  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3687  short-chain dehydrogenase/reductase SDR  29.18 
 
 
243 aa  101  1e-20  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_10628  short chain dehydrogenase  30.39 
 
 
239 aa  100  1e-20  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.10817  n/a   
 
 
-
 
NC_008699  Noca_4009  short-chain dehydrogenase/reductase SDR  36.36 
 
 
240 aa  101  1e-20  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011680  PHATRDRAFT_47104  non ribosomal peptide synthase  30.74 
 
 
1367 aa  101  1e-20  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_013131  Caci_3280  short-chain dehydrogenase/reductase SDR  35.09 
 
 
232 aa  100  2e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.798057  normal 
 
 
-
 
NC_014248  Aazo_3368  short-chain dehydrogenase/reductase SDR  31.42 
 
 
241 aa  100  2e-20  'Nostoc azollae' 0708  Bacteria  normal  0.119808  n/a   
 
 
-
 
NC_011886  Achl_0142  short-chain dehydrogenase/reductase SDR  36.96 
 
 
255 aa  100  2e-20  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
BN001305  ANIA_05318  hypothetical protein similar to nonribosomal peptide synthetase 10 (Broad)  31.02 
 
 
1270 aa  99.8  3e-20  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.556036  normal  0.849429 
 
 
-
 
NC_011901  Tgr7_2595  short-chain dehydrogenase/reductase SDR  32.29 
 
 
254 aa  99.8  3e-20  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2903  short-chain dehydrogenase/reductase SDR  38.73 
 
 
255 aa  99.8  3e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.700746  normal 
 
 
-
 
NC_013595  Sros_8710  Short-chain alcohol dehydrogenase of unknown specificity-like protein  34.22 
 
 
258 aa  99.8  3e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  28.96 
 
 
264 aa  99.8  3e-20  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4528  Short-chain dehydrogenase/reductase SDR  38.81 
 
 
258 aa  99.8  3e-20  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.831809  normal 
 
 
-
 
NC_009425  Ent638_4222  short-chain dehydrogenase/reductase SDR  30.22 
 
 
242 aa  100  3e-20  Enterobacter sp. 638  Bacteria  normal  0.186526  normal 
 
 
-
 
NC_013501  Rmar_2034  short-chain dehydrogenase/reductase SDR  34.36 
 
 
256 aa  99.4  4e-20  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05303  oxidoreductase  27.43 
 
 
239 aa  99.4  4e-20  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007958  RPD_4366  short-chain dehydrogenase/reductase SDR  38.18 
 
 
259 aa  99.8  4e-20  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.534322  normal 
 
 
-
 
NC_009997  Sbal195_0480  short-chain dehydrogenase/reductase SDR  29 
 
 
243 aa  99.4  4e-20  Shewanella baltica OS195  Bacteria  normal  0.853199  normal 
 
 
-
 
NC_011004  Rpal_0963  short-chain dehydrogenase/reductase SDR  38.18 
 
 
258 aa  99.4  4e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4141  short chain dehydrogenase/reductase family oxidoreductase  28.82 
 
 
243 aa  99.4  5e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007963  Csal_2456  short-chain dehydrogenase/reductase SDR  33.33 
 
 
255 aa  99.4  5e-20  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.588805  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  28.96 
 
 
264 aa  99  5e-20  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_2536  short chain dehydrogenase  31 
 
 
241 aa  99  6e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0488  short-chain dehydrogenase/reductase SDR  29.13 
 
 
244 aa  98.6  7e-20  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  28.96 
 
 
264 aa  98.6  7e-20  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_010501  PputW619_1563  oxidoreductase  37.37 
 
 
257 aa  99  7e-20  Pseudomonas putida W619  Bacteria  normal  normal  0.256146 
 
 
-
 
NC_009427  Saro_3738  short-chain dehydrogenase/reductase SDR  37.64 
 
 
253 aa  98.6  7e-20  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0501  short-chain dehydrogenase/reductase SDR  29.13 
 
 
244 aa  98.6  7e-20  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00365065 
 
 
-
 
NC_014158  Tpau_4205  short-chain dehydrogenase/reductase SDR  33.33 
 
 
225 aa  99  7e-20  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_1126  short-chain dehydrogenase/reductase SDR  34.03 
 
 
338 aa  98.6  8e-20  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5068  short-chain dehydrogenase/reductase SDR  37.68 
 
 
262 aa  98.6  8e-20  Conexibacter woesei DSM 14684  Bacteria  normal  0.534648  normal  0.433555 
 
 
-
 
NC_010681  Bphyt_2007  short chain dehydrogenase  33.33 
 
 
276 aa  98.6  8e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  0.372157  normal  0.691247 
 
 
-
 
NC_013411  GYMC61_0353  short-chain dehydrogenase/reductase SDR  30.77 
 
 
262 aa  98.6  9e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  28.96 
 
 
264 aa  98.6  9e-20  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1274  short-chain dehydrogenase/reductase SDR  36.49 
 
 
251 aa  98.6  9e-20  Sinorhizobium medicae WSM419  Bacteria  normal  0.062755  normal 
 
 
-
 
NC_008392  Bamb_5739  short-chain dehydrogenase/reductase SDR  33.04 
 
 
282 aa  98.2  9e-20  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.749773 
 
 
-
 
NC_009077  Mjls_0283  short-chain dehydrogenase/reductase SDR  41.21 
 
 
265 aa  98.2  1e-19  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0292  short-chain dehydrogenase/reductase SDR  41.21 
 
 
265 aa  98.2  1e-19  Mycobacterium sp. MCS  Bacteria  normal  0.893825  n/a   
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  28.51 
 
 
264 aa  98.2  1e-19  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  29.41 
 
 
264 aa  97.8  1e-19  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0302  short-chain dehydrogenase/reductase SDR  41.21 
 
 
265 aa  98.2  1e-19  Mycobacterium sp. KMS  Bacteria  normal  normal  0.407118 
 
 
-
 
NC_008726  Mvan_2848  short-chain dehydrogenase/reductase SDR  43.03 
 
 
276 aa  97.8  1e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.585035  normal 
 
 
-
 
NC_010557  BamMC406_6492  short-chain dehydrogenase/reductase SDR  33.04 
 
 
282 aa  97.4  2e-19  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6624  short-chain dehydrogenase/reductase SDR  37.89 
 
 
248 aa  97.1  2e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2895  short-chain dehydrogenase/reductase SDR  37.89 
 
 
248 aa  97.1  2e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A2202  short chain dehydrogenase  32.46 
 
 
276 aa  97.4  2e-19  Burkholderia xenovorans LB400  Bacteria  normal  0.516821  decreased coverage  0.00204142 
 
 
-
 
NC_012848  Rleg_4853  short-chain dehydrogenase/reductase SDR  31.17 
 
 
248 aa  97.8  2e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.154391  normal  0.241568 
 
 
-
 
NC_013739  Cwoe_2494  short-chain dehydrogenase/reductase SDR  34.87 
 
 
291 aa  97.8  2e-19  Conexibacter woesei DSM 14684  Bacteria  normal  0.60014  normal  0.0881916 
 
 
-
 
NC_008726  Mvan_4157  short-chain dehydrogenase/reductase SDR  32.29 
 
 
233 aa  96.7  3e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.981974  normal 
 
 
-
 
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