| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0251 |
|---|
| Symbol | |
|---|
| ID | 5164229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 312820 |
|---|
| End bp | 313587 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640547750 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001229040 |
|---|
| Protein GI | 148262334 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAAA ACAGCGACAA CAGAGTTGCT TTAGTCACCG GTGGTGCCCA GGGGATCGGC
AAGGGCATTG CCTTTCGGTT TGTGGCGGAC GGGATGCGTG TGGCAATTGC CGACATCGAC
GCCGAGGCGG TAGAAGAGAC GGCGCGGGAA CTGGGCCCAT CGGCCAGTGG ATATGTGGTC
GATGTGGCAG ACGAGTCGGC GGTGTCGGAG TTGCTGCGCT CCATAGGCGG TAGCTATGGC
CGTCTCGATG CCTTGATCAC CAGCGCAGGT ATTGCTACAG CTGTGGCCGC ACCGGTGGAG
CAGTTGGCGC TGGCCGACTG GAACCGGGTG CTGGGGGTTA ACCTTACCGG CACCTTTCTC
TGCTGCAAGC ATGCAGTGCC GCTTCTGCGC TCCTCTCATG GGGCCGTCGT CACTATTGCC
TCAACCCGAG CTATGCAGTC TGAGCCCGAT ACCGTGGCCT ATTCCGCCAG CAAAGGTGGG
GTGGTTTCCC TGACTCACGC CTTGGCAATA AGTCTTGGCC CGCAGATACG GGTAAACTGC
ATCAGCCCAG GCTGGATCGC CGTTGATAGC TGGCGTAAGC GCAGCAGACG GCAAGAGCCG
GTGTTGAGCC CGAACGATCA TGCTCAGCAT CCGGTGGGAC GAGTTGGTCG TCCAGAGGAT
GTGGCCGCCT TGGCTGCATA TCTGATTTCG CCAGAGGCAG GGTTTGTCAC AGGGCAGAAT
TTTGTCGTAG ACGGTGGGAT GACGCGAAAG ATGATCTACG CCGATTAA
|
|---|
| Protein sequence | MMQNSDNRVA LVTGGAQGIG KGIAFRFVAD GMRVAIADID AEAVEETARE LGPSASGYVV
DVADESAVSE LLRSIGGSYG RLDALITSAG IATAVAAPVE QLALADWNRV LGVNLTGTFL
CCKHAVPLLR SSHGAVVTIA STRAMQSEPD TVAYSASKGG VVSLTHALAI SLGPQIRVNC
ISPGWIAVDS WRKRSRRQEP VLSPNDHAQH PVGRVGRPED VAALAAYLIS PEAGFVTGQN
FVVDGGMTRK MIYAD
|
|---|
| |