| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_0283 |
|---|
| Symbol | |
|---|
| ID | 4876029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 315725 |
|---|
| End bp | 316522 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640137597 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001068587 |
|---|
| Protein GI | 126432896 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGTT ACACCGATCG GCGCGTCCTC ATCACCGGTG GCGGATCGGG CATCGGACAG
GCGTGCGTGC TGCGGATCCT CGACGAGGGC GGGCATGTCG TCGCCGCCGA CGTCAGCGAA
GCCGGACTGA AGGACACCGT GAGCAAGGCG CAGTCCGCCG CCGACCGGCT GTCGACGCTC
GTCATGGACG TCGGTGACGA GGAGTCGGTG AGGGCCGGGG TGGCCGAGGC GATCGGCATC
CTCGGCGGGC TGGACACCCT CGTCAACGTC GCGGGGATAC TGCGCTCGGC GCGGCTCGAA
CAGACCACGC TGACCGACTT CGAGCGGGTG TTGCGGATCA ATCTGGTCGG CACGTTCCTG
GTCACGCGGG AGGCGATTTC CGCGCTGCGC AACGGGAACG GCCCCGCCGT GGTCAACTTC
AGCTCGACGT CGGCGCATTT CGGCCATCCG TACATGTCGG CCTACGCCGC CTCCAAGGGC
GGCATCCTGT CGATGACCCA CACCTTGGCG CTCGAGTTCG CAAAAGACGG CATCCGCTTC
AATTGCGTTC AGCCGGGGTC GATCTCGTCT GGTATGACCG ATGGCACCGG TCAGGCCAGA
CAGAGCGTGG GTCCGGGCCT GCCCGACGAC GCCGACTACT CGCTGTTCTC GCGGCTGCAG
CCGATGCTGG CCATCGACGG CGGCGCGATG TTCGCCGACC CGTCGGCCGT CGCCTCGGTG
GTGGCGATGC TCGGGTCGGC CGACGCGTTC TTCGTCACCG GCACCGAGGT GCGGGTCGAC
GGCGGCACCC ACATGTGA
|
|---|
| Protein sequence | MSRYTDRRVL ITGGGSGIGQ ACVLRILDEG GHVVAADVSE AGLKDTVSKA QSAADRLSTL
VMDVGDEESV RAGVAEAIGI LGGLDTLVNV AGILRSARLE QTTLTDFERV LRINLVGTFL
VTREAISALR NGNGPAVVNF SSTSAHFGHP YMSAYAASKG GILSMTHTLA LEFAKDGIRF
NCVQPGSISS GMTDGTGQAR QSVGPGLPDD ADYSLFSRLQ PMLAIDGGAM FADPSAVASV
VAMLGSADAF FVTGTEVRVD GGTHM
|
|---|
| |