| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_4152 |
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| Symbol | |
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| ID | 4895043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009040 |
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| Strand | - |
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| Start bp | 89633 |
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| End bp | 90379 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640110543 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001041855 |
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| Protein GI | 126464879 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 147 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 96 |
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| Fosmid unclonability p-value | 0.883232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGA TCGATCTGGC CGGCCGCGTG GCCGTGGTGA CGGGCGGCGC GCAGGGGATC
GGGCGCGCCG TGGCCGAGCG GCTGATCGCC TCGGGGGCGC GGGTCTGCCT GTGGGACCGC
GACGCCGAAC GGGCCGCGGC GACGGCGGCC GAACTGGGCG GGAACAGCTT CTTTCAGGTG
GTGGATCAGG TGGATTTCAC GGCGGTAAAG GCCGCCACCG ACGCCACCGA AGCCACGGGC
GGCCGGATCG ACATCCTGAT CGCCAACGCG GGCATCGCCG GCAGCAATGC GCCGGTCGCC
GACTACCCGG TCGAGGAATG GCACCGCATC ATCGATATCA ACCTGAACGG TGTCTTCCAT
TGCTGCAAGG CGGTGGTGCC CGGCATGAAG GCCCGCGGAT ACGGGCGCAT CGTCACGGTC
GCCTCGATCG CCGGCAAGGA AGGCAATCCC AATGCGGCCG CCTATTCGGC CTCGAAGGCC
GGGGTCATCG CTTTGACCAA ATCGCTGGGC AAGGAGGTCG CCGGCCAGGA TATCGCCGTC
AATTGCGTGA CCCCGGCCGC CGCCCGCACG CAGATCTTCG ACCAGATGGC GCAGAGCCAC
ATCGACTACA TGCTGTCGCG CATCCCGCGC GGCCGCTTTC TGGACCTGGA CGAGGCCGCC
GCGATGATCG CGTGGCTGGC CAGTGCCGAG AACAGCTTTA CCACCGGTGC CGTCTTCGAT
CTCTCCGGCG GCCGGGCCAC CTATTGA
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| Protein sequence | MNQIDLAGRV AVVTGGAQGI GRAVAERLIA SGARVCLWDR DAERAAATAA ELGGNSFFQV
VDQVDFTAVK AATDATEATG GRIDILIANA GIAGSNAPVA DYPVEEWHRI IDINLNGVFH
CCKAVVPGMK ARGYGRIVTV ASIAGKEGNP NAAAYSASKA GVIALTKSLG KEVAGQDIAV
NCVTPAAART QIFDQMAQSH IDYMLSRIPR GRFLDLDEAA AMIAWLASAE NSFTTGAVFD
LSGGRATY
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