| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1390 |
|---|
| Symbol | |
|---|
| ID | 3693702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 1697522 |
|---|
| End bp | 1698277 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637731644 |
|---|
| Product | short chain dehydrogenase/reductase family oxidoreductase |
|---|
| Protein accession | YP_336547 |
|---|
| Protein GI | 76819460 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.399104 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCCAGC TATCCTCCGA TCCAATCTCC GGCGCGTCGC TCGCCGGCCG GACCGCGTTC
GTCACGGGCG GCGGGCGCGG CCTCGGTGCC GCGATCTGCG GCGAGCTCGC GCGCGCCGGC
GCGCACGTCG TCGTCGCCGA TCTCGACGAA GCGCGCGCGC GCGGCGTCGC CGAGCGGCTT
GCGCGGGACG GCGCGCGCGC GGTGCCGCTC GGCGTCGACG TCGGCGACGA GACGTCGGTG
CGCCACGCAT TCGACGCGGC GCGCGAATCG CTCGGCGACA TCGACGTGAT CGTCAACAAC
GCGGCGATCG ACGTGACGGC CGCGATCGAC GACGTGAGCG TCGACGCCTG GCGGCAGGTG
CTGACGACGA ACCTGTTCGG TCCGTACCTG CTGTGTCACG CCGCCGTGCC GATGATGAAG
GCGCGCGGCC GCGGGCACAT CGTCAACATC GCGTCGACCG CGGCCAAGCG CGCGTGGCCG
AATGCGTCCG CGTATCACGC GACGAAGTGG GGGCTGCTCG GCCTGTCGCA TGCATTGCAC
GCGGAGCTGC GCCCGTCGGG CGTGCATGTG TCGGCGATCG TCGCGGGCGG CATGCGCACG
CCGTTCCTGC TCGATCGCTT TCCCGACATC GACGCCGATA CGTTGCAGCC GCCCGAGCAC
GTCGCGGCGG CCGTGCGCTT CGTGCTCACG CAGCCGCCGG GCACGGTGAT TCCCGAGGTG
ATGGTGCTGC CCGTGAAGGA AACGTCATGG CCGTGA
|
|---|
| Protein sequence | MSQLSSDPIS GASLAGRTAF VTGGGRGLGA AICGELARAG AHVVVADLDE ARARGVAERL
ARDGARAVPL GVDVGDETSV RHAFDAARES LGDIDVIVNN AAIDVTAAID DVSVDAWRQV
LTTNLFGPYL LCHAAVPMMK ARGRGHIVNI ASTAAKRAWP NASAYHATKW GLLGLSHALH
AELRPSGVHV SAIVAGGMRT PFLLDRFPDI DADTLQPPEH VAAAVRFVLT QPPGTVIPEV
MVLPVKETSW P
|
|---|
| |