Gene RSP_3888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3888 
SymbolfabG 
ID4796501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_009007 
Strand
Start bp57804 
End bp58550 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content68% 
IMG OID640102999 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001033848 
Protein GI125654654 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.689066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGA TCGATCTGGC CGGCCGCGTG GCCGTGGTGA CGGGCGGCGC GCAGGGGATC 
GGGCGCGCCG TGGCCGAGCG GCTGATCGCC TCGGGGGCGC GGGTCTGCCT GTGGGACCGC
GACGCCGGGC GGGCCGCGGC GACGGCGGCC GAACTGGGCG GGAACAGCTT CTTTCAGGTG
GTGGATCAGG TGGATTTCAC GGCGGTAAAG GCCGCCGCCG ACGCCACCGA AGCCACGGGC
GGCCGGATCG ACATCCTGAT CGCCAACGCG GGCATCGCCG GCAGCAATGC GCCGGTCGCC
GACTACCCGG TCGAGGAATG GCACCGCATC ATCGATATCA ACCTGAACGG TGTCTTCCAT
TGCTGCAAGG CGGTGGTGCC CGGCATGAAG GCCCACGGAT ACGGGCGCAT CGTCACGGTC
GCCTCGATCG CCGGCAAGGA AGGCAATCCC AATGCGGCCG CCTATTCGGC CTCGAAGGCC
GGGGTCATCG CTTTGACCAA ATCGCTGGGC AAGGAGGTCG CCGGCCAGGA TATCGCCGTC
AATTGCGTGA CCCCGGCCGC CGCCCGCACG CAGATCTTCG ACCAGATGGC GCAGAGCCAC
ATCGACTACA TGCTGTCGCG CATCCCGCGC GGCCGCTTTC TGGATCTGGA CGAGGCCGCG
GCGATGATCG CGTGGCTGGC CAGTGCCGAG AACAGCTTTA CCACCGGTGC CGTCTTCGAT
CTCTCCGGCG GCCGGGCCAC CTATTGA
 
Protein sequence
MNQIDLAGRV AVVTGGAQGI GRAVAERLIA SGARVCLWDR DAGRAAATAA ELGGNSFFQV 
VDQVDFTAVK AAADATEATG GRIDILIANA GIAGSNAPVA DYPVEEWHRI IDINLNGVFH
CCKAVVPGMK AHGYGRIVTV ASIAGKEGNP NAAAYSASKA GVIALTKSLG KEVAGQDIAV
NCVTPAAART QIFDQMAQSH IDYMLSRIPR GRFLDLDEAA AMIAWLASAE NSFTTGAVFD
LSGGRATY