| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5739 |
|---|
| Symbol | |
|---|
| ID | 4314646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 191941 |
|---|
| End bp | 192789 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638153581 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_777620 |
|---|
| Protein GI | 115360483 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.749773 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGACA GCAAAGTTTG GTTCATCACG GGCTGCTCCG GCGGCCTGGG TCTTCAGCTT
GCCGAGGCGG TACTTTCCGC CGGCCACACA CTGGCGGCAA CGGCGCGGGA CGTGACGCGT
CTCGCCAGCC TGACGGACGC ATATGGCGAC CGGATTCTGG CGATCCCGCT GGACATCACC
GACCCGGACG CGGCGCGCGG CGCCGTCAGT CTGGCGGTCG AGCAATTCGG CCGTCTCGAC
GTGCTGGTGA ACAACGCGGG CTATGCCGAT CTGGCGTCGA TCGAAGACAT CACCGACCAG
GCGCTGCACG AGCAGATCGA GGTCAACTTC TTCGGCGTGT GCAATGTCAC GCGCGCGGCA
CTGCCGTTCA TGCGTCGGCA ACGGGCCGGC CACATCATTC AGATCTCGTC GGTGGGCGGA
CGAGTCGGCG GCCCCGGGCT CGCCGCCTAT CAGGCAGCCA AGTGGGCGGT GGGCGGGTTC
TCCGAAGTGC TGGCGAAGGA GGTCCGCGAT TTCGGCATCC AGGTCACGAT CGTCGAGCCG
GGATCGATGC GGACCCGCTG GGCCGGCTCG TCGATGACTA TTCCGCCGAT CAGCGACGCG
TACAAGCCGA TCATCGAGCC GGTAGCGGCA CGCTTGCGCA GCATCGACGG TGCGCAACCC
GGCGATCCCG CGCGGATTGC CCGCGCGCTG CTCGGCATCG CCGGATCGCC GATAGCGCCT
TTGCGATTGC TGATGGGCAG CGACGCGGTC GCGGTAGCCG GCGCGGCGGC GAGGTTCCGT
GCGGAAGAGG ACGCGCAATG GCGCGAATTG AGCGAATCGG TTTCGTTTCC GCCGGCGCAG
ACCGAATGA
|
|---|
| Protein sequence | MHDSKVWFIT GCSGGLGLQL AEAVLSAGHT LAATARDVTR LASLTDAYGD RILAIPLDIT
DPDAARGAVS LAVEQFGRLD VLVNNAGYAD LASIEDITDQ ALHEQIEVNF FGVCNVTRAA
LPFMRRQRAG HIIQISSVGG RVGGPGLAAY QAAKWAVGGF SEVLAKEVRD FGIQVTIVEP
GSMRTRWAGS SMTIPPISDA YKPIIEPVAA RLRSIDGAQP GDPARIARAL LGIAGSPIAP
LRLLMGSDAV AVAGAAARFR AEEDAQWREL SESVSFPPAQ TE
|
|---|
| |