More than 300 homologs were found in PanDaTox collection
for query gene Ndas_1576 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_1576  short-chain dehydrogenase/reductase SDR  100 
 
 
228 aa  461  1e-129  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.126746  normal  0.0331408 
 
 
-
 
NC_014165  Tbis_2638  short-chain dehydrogenase/reductase SDR  63.56 
 
 
226 aa  291  5e-78  Thermobispora bispora DSM 43833  Bacteria  normal  0.820451  normal 
 
 
-
 
NC_013159  Svir_11220  short-chain alcohol dehydrogenase  63.44 
 
 
228 aa  285  4e-76  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.266926  normal  0.0891771 
 
 
-
 
NC_008541  Arth_0358  short-chain dehydrogenase/reductase SDR  59.29 
 
 
244 aa  264  8e-70  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1765  short-chain dehydrogenase/reductase SDR  60.09 
 
 
228 aa  261  8e-69  Salinispora tropica CNB-440  Bacteria  normal  0.316693  normal 
 
 
-
 
NC_009953  Sare_1751  short-chain dehydrogenase/reductase SDR  61.43 
 
 
228 aa  258  5.0000000000000005e-68  Salinispora arenicola CNS-205  Bacteria  normal  0.546455  normal  0.0252513 
 
 
-
 
NC_011886  Achl_0572  short-chain dehydrogenase/reductase SDR  56.44 
 
 
233 aa  250  1e-65  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.378892 
 
 
-
 
NC_008148  Rxyl_0706  short-chain dehydrogenase/reductase SDR  40.69 
 
 
242 aa  150  2e-35  Rubrobacter xylanophilus DSM 9941  Bacteria  hitchhiker  0.00246779  n/a   
 
 
-
 
NC_007614  Nmul_A1794  Short-chain dehydrogenase/reductase SDR  38.21 
 
 
238 aa  137  1e-31  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1386  short-chain dehydrogenase/reductase SDR  36.44 
 
 
251 aa  135  5e-31  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6034  short-chain dehydrogenase/reductase SDR  36.44 
 
 
249 aa  135  5e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.311099  normal  0.357873 
 
 
-
 
NC_008544  Bcen2424_6443  short-chain dehydrogenase/reductase SDR  36.44 
 
 
259 aa  135  6.0000000000000005e-31  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0150364  normal 
 
 
-
 
NC_008392  Bamb_5653  short-chain dehydrogenase/reductase SDR  36.86 
 
 
251 aa  134  9e-31  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.383425 
 
 
-
 
NC_010557  BamMC406_6401  short-chain dehydrogenase/reductase SDR  36.86 
 
 
249 aa  134  9.999999999999999e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  0.476786  normal  0.058074 
 
 
-
 
NC_009078  BURPS1106A_A3043  short chain dehydrogenase/reductase family oxidoreductase  38.14 
 
 
251 aa  134  1.9999999999999998e-30  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA1991  short chain dehydrogenase/reductase family oxidoreductase  38.14 
 
 
251 aa  134  1.9999999999999998e-30  Burkholderia mallei ATCC 23344  Bacteria  normal  0.371693  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1390  short chain dehydrogenase/reductase family oxidoreductase  38.14 
 
 
251 aa  134  1.9999999999999998e-30  Burkholderia pseudomallei 1710b  Bacteria  normal  0.399104  n/a   
 
 
-
 
NC_008835  BMA10229_1302  short chain dehydrogenase/reductase family oxidoreductase  38.14 
 
 
251 aa  134  1.9999999999999998e-30  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A2278  short chain dehydrogenase/reductase family oxidoreductase  38.14 
 
 
251 aa  134  1.9999999999999998e-30  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1014  short chain dehydrogenase/reductase family oxidoreductase  38.14 
 
 
251 aa  134  1.9999999999999998e-30  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010087  Bmul_5439  short-chain dehydrogenase/reductase SDR  37.02 
 
 
249 aa  132  5e-30  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.012898 
 
 
-
 
NC_009075  BURPS668_A3172  short chain dehydrogenase/reductase family oxidoreductase  37.71 
 
 
251 aa  130  2.0000000000000002e-29  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3728  short-chain dehydrogenase/reductase SDR  34.18 
 
 
241 aa  129  3e-29  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2186  3-ketoacyl-(acyl-carrier-protein) reductase  36.41 
 
 
241 aa  129  4.0000000000000003e-29  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0152  short-chain dehydrogenase/reductase SDR  37.71 
 
 
247 aa  128  7.000000000000001e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007348  Reut_B4388  Short-chain dehydrogenase/reductase SDR  40.43 
 
 
249 aa  125  5e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.520799  n/a   
 
 
-
 
NC_007404  Tbd_0734  putative short chain dehydrogenase  35.94 
 
 
242 aa  120  1.9999999999999998e-26  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.491859  normal 
 
 
-
 
NC_008148  Rxyl_3009  short-chain dehydrogenase/reductase SDR  36.13 
 
 
260 aa  117  1.9999999999999998e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.41043  n/a   
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  36.13 
 
 
236 aa  116  3e-25  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_012857  Rpic12D_3804  short-chain dehydrogenase/reductase SDR  33.62 
 
 
271 aa  115  5e-25  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4881  short-chain dehydrogenase/reductase SDR  33.62 
 
 
271 aa  115  5e-25  Ralstonia pickettii 12J  Bacteria  normal  0.169206  normal  0.0484523 
 
 
-
 
NC_013457  VEA_000420  oxidoreductase short-chain dehydrogenase/reductase family  32.62 
 
 
239 aa  115  5e-25  Vibrio sp. Ex25  Bacteria  normal  0.637186  n/a   
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  40.44 
 
 
281 aa  114  8.999999999999998e-25  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_0216  short-chain dehydrogenase/reductase SDR  33.48 
 
 
223 aa  113  2.0000000000000002e-24  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.209414  normal 
 
 
-
 
NC_013501  Rmar_1462  short-chain dehydrogenase/reductase SDR  38.71 
 
 
266 aa  113  3e-24  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3687  short-chain dehydrogenase/reductase SDR  32.19 
 
 
243 aa  111  8.000000000000001e-24  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4141  short chain dehydrogenase/reductase family oxidoreductase  32.05 
 
 
243 aa  111  1.0000000000000001e-23  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009784  VIBHAR_05303  oxidoreductase  32.19 
 
 
239 aa  111  1.0000000000000001e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010483  TRQ2_1110  3-oxoacyl-(acyl-carrier-protein) reductase  32.6 
 
 
246 aa  110  1.0000000000000001e-23  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE0535  short chain dehydrogenase  28.7 
 
 
262 aa  110  2.0000000000000002e-23  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_1575  short chain dehydrogenase  32.33 
 
 
249 aa  110  2.0000000000000002e-23  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_2477  short-chain dehydrogenase/reductase SDR  32.08 
 
 
236 aa  109  4.0000000000000004e-23  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.433499  n/a   
 
 
-
 
NC_007511  Bcep18194_B1510  Short-chain dehydrogenase/reductase SDR  33.49 
 
 
258 aa  109  4.0000000000000004e-23  Burkholderia sp. 383  Bacteria  normal  0.623129  normal  0.55267 
 
 
-
 
NC_009718  Fnod_0609  short-chain dehydrogenase/reductase SDR  31.55 
 
 
232 aa  108  5e-23  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.000037264  n/a   
 
 
-
 
NC_009486  Tpet_1020  3-oxoacyl-(acyl-carrier-protein) reductase  32.16 
 
 
246 aa  108  5e-23  Thermotoga petrophila RKU-1  Bacteria  normal  0.0122832  n/a   
 
 
-
 
NC_008146  Mmcs_3395  short-chain dehydrogenase/reductase SDR  36.65 
 
 
255 aa  108  5e-23  Mycobacterium sp. MCS  Bacteria  normal  0.746696  n/a   
 
 
-
 
NC_009077  Mjls_3405  short-chain dehydrogenase/reductase SDR  36.49 
 
 
246 aa  108  6e-23  Mycobacterium sp. JLS  Bacteria  normal  normal  0.772329 
 
 
-
 
NC_008705  Mkms_3457  short-chain dehydrogenase/reductase SDR  36.49 
 
 
246 aa  108  6e-23  Mycobacterium sp. KMS  Bacteria  normal  0.678887  normal  0.189586 
 
 
-
 
NC_009954  Cmaq_1409  aldose dehydrogenase  31.82 
 
 
258 aa  108  7.000000000000001e-23  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
NC_013132  Cpin_1337  3-ketoacyl-(acyl-carrier-protein) reductase  31.11 
 
 
238 aa  108  8.000000000000001e-23  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.541378  normal 
 
 
-
 
NC_013501  Rmar_2034  short-chain dehydrogenase/reductase SDR  35.24 
 
 
256 aa  108  9.000000000000001e-23  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0480  short-chain dehydrogenase/reductase SDR  30.77 
 
 
243 aa  108  9.000000000000001e-23  Shewanella baltica OS195  Bacteria  normal  0.853199  normal 
 
 
-
 
NC_007511  Bcep18194_B3095  3-oxoacyl-[acyl-carrier-protein] reductase  33.79 
 
 
246 aa  107  1e-22  Burkholderia sp. 383  Bacteria  normal  normal  0.025547 
 
 
-
 
NC_007512  Plut_1309  short chain dehydrogenase/reductase family oxidoreductase  36.44 
 
 
236 aa  108  1e-22  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_1508  short-chain dehydrogenase/reductase SDR  37.39 
 
 
233 aa  106  2e-22  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1481  short-chain dehydrogenase/reductase SDR  33.05 
 
 
239 aa  107  2e-22  Roseiflexus sp. RS-1  Bacteria  normal  0.175599  normal 
 
 
-
 
NC_013037  Dfer_2590  short chain dehydrogenase  32.89 
 
 
236 aa  107  2e-22  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4381  short-chain dehydrogenase/reductase SDR  28.63 
 
 
248 aa  107  2e-22  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.297747  hitchhiker  0.00314525 
 
 
-
 
NC_009767  Rcas_3908  short-chain dehydrogenase/reductase SDR  35.84 
 
 
272 aa  107  2e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.106718  normal  0.186536 
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  33.33 
 
 
264 aa  107  2e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010087  Bmul_5635  short-chain dehydrogenase/reductase SDR  31.51 
 
 
247 aa  106  3e-22  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1855  short chain dehydrogenase  34.86 
 
 
250 aa  106  3e-22  Acidiphilium cryptum JF-5  Bacteria  normal  0.555083  n/a   
 
 
-
 
NC_009425  Ent638_4222  short-chain dehydrogenase/reductase SDR  29.69 
 
 
242 aa  106  3e-22  Enterobacter sp. 638  Bacteria  normal  0.186526  normal 
 
 
-
 
NC_013595  Sros_8710  Short-chain alcohol dehydrogenase of unknown specificity-like protein  33.67 
 
 
258 aa  105  4e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0599  short-chain dehydrogenase/reductase SDR  31.76 
 
 
239 aa  106  4e-22  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_2374  short-chain dehydrogenase/reductase SDR  32.73 
 
 
256 aa  106  4e-22  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4057  short-chain dehydrogenase/reductase SDR  31.33 
 
 
239 aa  105  4e-22  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_0167  3-oxoacyl-(acyl-carrier-protein) reductase  32.41 
 
 
245 aa  105  4e-22  Chlorobium limicola DSM 245  Bacteria  normal  0.619009  n/a   
 
 
-
 
NC_007413  Ava_2536  short chain dehydrogenase  30.87 
 
 
241 aa  105  5e-22  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2262  short-chain dehydrogenase/reductase SDR  33.06 
 
 
244 aa  105  5e-22  Candidatus Koribacter versatilis Ellin345  Bacteria  hitchhiker  0.0000989308  normal 
 
 
-
 
NC_013501  Rmar_2639  short-chain dehydrogenase/reductase SDR  33.76 
 
 
238 aa  105  5e-22  Rhodothermus marinus DSM 4252  Bacteria  normal  0.37123  n/a   
 
 
-
 
NC_011370  Rleg2_6297  short-chain dehydrogenase/reductase SDR  34.76 
 
 
262 aa  105  6e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.251558  normal 
 
 
-
 
NC_007952  Bxe_B0354  3-oxoacyl-[acyl-carrier-protein] reductase  36.57 
 
 
240 aa  105  6e-22  Burkholderia xenovorans LB400  Bacteria  normal  0.679576  normal 
 
 
-
 
NC_010831  Cphamn1_0247  short-chain dehydrogenase/reductase SDR  32.58 
 
 
223 aa  105  6e-22  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2742  3-oxoacyl-(acyl-carrier-protein) reductase  30.59 
 
 
246 aa  105  6e-22  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0251  short-chain dehydrogenase/reductase SDR  33.48 
 
 
255 aa  105  7e-22  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2555  short-chain dehydrogenase/reductase SDR  31.42 
 
 
231 aa  105  7e-22  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.459049  n/a   
 
 
-
 
NC_013946  Mrub_1117  short-chain dehydrogenase/reductase SDR  32.6 
 
 
233 aa  105  7e-22  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.000000223483  normal  0.996665 
 
 
-
 
NC_009718  Fnod_0313  3-oxoacyl-(acyl-carrier-protein) reductase  30.91 
 
 
239 aa  105  7e-22  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.00087118  n/a   
 
 
-
 
NC_009487  SaurJH9_2505  short-chain dehydrogenase/reductase SDR  31.42 
 
 
231 aa  105  7e-22  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1779  short-chain dehydrogenase/reductase SDR  31.92 
 
 
249 aa  105  7e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  31.02 
 
 
264 aa  104  1e-21  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2595  short-chain dehydrogenase/reductase SDR  32.3 
 
 
254 aa  104  1e-21  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7123  Short-chain dehydrogenase/reductase SDR  32.57 
 
 
249 aa  104  1e-21  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007633  MCAP_0250  short chain dehydrogenase/reductase family oxidoreductase  28.81 
 
 
240 aa  103  1e-21  Mycoplasma capricolum subsp. capricolum ATCC 27343  Bacteria  normal  0.183431  n/a   
 
 
-
 
NC_008009  Acid345_2206  short-chain dehydrogenase/reductase SDR  34.93 
 
 
261 aa  104  1e-21  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0587036  normal  0.882414 
 
 
-
 
NC_009667  Oant_0916  short-chain dehydrogenase/reductase SDR  31.06 
 
 
246 aa  104  1e-21  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  31.94 
 
 
264 aa  104  1e-21  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_009456  VC0395_0184  short chain dehydrogenase/reductase family oxidoreductase  31.33 
 
 
239 aa  104  1e-21  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3280  short-chain dehydrogenase/reductase SDR  34.78 
 
 
232 aa  104  1e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.798057  normal 
 
 
-
 
NC_008739  Maqu_4109  short-chain dehydrogenase/reductase SDR  34.06 
 
 
234 aa  104  1e-21  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  31.46 
 
 
264 aa  103  2e-21  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  31.46 
 
 
264 aa  103  2e-21  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0131  3-oxoacyl-(acyl-carrier-protein) reductase  32.87 
 
 
245 aa  103  2e-21  Chlorobium luteolum DSM 273  Bacteria  normal  0.120855  normal 
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  31.46 
 
 
264 aa  103  2e-21  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0176  short chain dehydrogenase  36.2 
 
 
255 aa  103  2e-21  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1835  3-oxoacyl-(acyl-carrier-protein) reductase  31.11 
 
 
244 aa  103  2e-21  Thermosipho melanesiensis BI429  Bacteria  normal  0.686329  n/a   
 
 
-
 
NC_008639  Cpha266_2492  3-oxoacyl-[acyl-carrier-protein] reductase  31.96 
 
 
245 aa  103  2e-21  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1449  short chain dehydrogenase  27.8 
 
 
262 aa  103  2e-21  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_0026  short-chain dehydrogenase/reductase SDR  32.41 
 
 
269 aa  103  3e-21  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
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