50 decreased-coverage genes were found for selected organism/s



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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
Dbac_0143  CDS  NC_013173  172707  173627  -  921  putative manganese-dependent inorganic pyrophosphatase  YP_003156687  decreased coverage  0.000000077793  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_0144    NC_013173  173718  174386  -  669      decreased coverage  0.000000495152  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_0249  CDS  NC_013173  293188  293655  +  468  cytochrome c family protein  YP_003156792  decreased coverage  0.00000623647  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_0279  CDS  NC_013173  331150  332463  +  1314  sulfite reductase, dissimilatory-type alpha subunit  YP_003156822  decreased coverage  0.000000469369  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_0339  CDS  NC_013173  397813  398469  +  657  TrkA-N domain protein  YP_003156882  decreased coverage  0.00738023  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_0514  CDS  NC_013173  594727  595209  +  483  hypothetical protein  YP_003157054  decreased coverage  0.00000123874  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_0665  CDS  NC_013173  741364  742389  +  1026  rod shape-determining protein MreB  YP_003157204  decreased coverage  0.00000200896  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_0858  CDS  NC_013173  930660  931445  +  786  phosphonate ABC transporter, inner membrane subunit  YP_003157392  decreased coverage  0.00704551  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1070  CDS  NC_013173  1175751  1178462  -  2712  ATPase, P-type (transporting), HAD superfamily, subfamily IC  YP_003157599  decreased coverage  0.00103612  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1071    NC_013173  1178656  1178874  -  219      decreased coverage  0.0000181601  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1072    NC_013173  1178934  1179163  -  230      decreased coverage  0.0000188903  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1073    NC_013173  1179160  1179648  -  489      decreased coverage  0.0000428725  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1076  CDS  NC_013173  1180773  1182698  +  1926  sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family  YP_003157600  decreased coverage  0.000748726  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1248  CDS  NC_013173  1377469  1377996  +  528  Lytic transglycosylase catalytic  YP_003157767  decreased coverage  0.00404625  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1249  CDS  NC_013173  1378018  1378398  +  381  hypothetical protein  YP_003157768  decreased coverage  0.00290772  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1451  CDS  NC_013173  1640442  1642304  +  1863  DNA topoisomerase III  YP_003157961  decreased coverage  0.000215899  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1452  CDS  NC_013173  1642301  1643479  +  1179  response regulator receiver protein  YP_003157962  decreased coverage  0.000159785  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1493  CDS  NC_013173  1684610  1685038  -  429  hypothetical protein  YP_003158002  decreased coverage  0.00781741  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1510  CDS  NC_013173  1707147  1708871  +  1725  methyl-accepting chemotaxis sensory transducer with Cache sensor  YP_003158019  decreased coverage  0.00534894  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1530  CDS  NC_013173  1736327  1736692  -  366  hypothetical protein  YP_003158039  decreased coverage  0.00106363  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1531  CDS  NC_013173  1737035  1737550  +  516  UspA domain protein  YP_003158040  decreased coverage  0.00154671  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1560  CDS  NC_013173  1766981  1767190  -  210  hypothetical protein  YP_003158069  decreased coverage  0.00968564  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1690  CDS  NC_013173  1921363  1923252  +  1890  AMP-dependent synthetase and ligase  YP_003158198  decreased coverage  0.00282704  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1734  CDS  NC_013173  1975615  1976838  -  1224  peptidase M24  YP_003158241  decreased coverage  0.00987909  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1735  CDS  NC_013173  1976835  1977872  -  1038  Radical SAM domain protein  YP_003158242  decreased coverage  0.00136048  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1790  CDS  NC_013173  2041801  2042202  +  402  Holliday junction resolvase YqgF  YP_003158297  decreased coverage  0.00751815  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1791  CDS  NC_013173  2042199  2043218  +  1020  aminodeoxychorismate lyase  YP_003158298  decreased coverage  0.00439567  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1813  CDS  NC_013173  2067104  2068684  -  1581  pseudouridine synthase, RluA family  YP_003158320  decreased coverage  0.000000964916  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1843  CDS  NC_013173  2101466  2102791  -  1326  nucleotide sugar dehydrogenase  YP_003158350  decreased coverage  0.0000229884  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1952  CDS  NC_013173  2245470  2246927  +  1458  cysteinyl-tRNA synthetase  YP_003158456  decreased coverage  0.00515246  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_1983  CDS  NC_013173  2276097  2276681  -  585  Fimbrial assembly family protein  YP_003158487  decreased coverage  0.00407145  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_2020  CDS  NC_013173  2323925  2325286  -  1362  putative aminopeptidase 1  YP_003158522  decreased coverage  0.0000190862  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_2021  CDS  NC_013173  2325382  2325546  -  165  Rubredoxin-type Fe(Cys)4 protein  YP_003158523  decreased coverage  0.00000050094  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_2022  CDS  NC_013173  2325597  2327015  -  1419  30S ribosomal protein S1  YP_003158524  decreased coverage  0.000000578746  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_2101  CDS  NC_013173  2408682  2410718  -  2037  PAS/PAC sensor hybrid histidine kinase  YP_003158602  decreased coverage  0.007905  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_2102  CDS  NC_013173  2410708  2411286  -  579  hypothetical protein  YP_003158603  decreased coverage  0.00483592  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_2466  CDS  NC_013173  2831145  2831651  -  507  Ferroxidase  YP_003158961  decreased coverage  0.00000323257  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_2467  CDS  NC_013173  2831682  2832197  -  516  Redoxin domain protein  YP_003158962  decreased coverage  0.000000376738  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_2594  CDS  NC_013173  2954820  2955017  +  198  hypothetical protein  YP_003159087  decreased coverage  0.0000000170422  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_2688  CDS  NC_013173  3079755  3080228  +  474  transcriptional regulator, AsnC family  YP_003159181  decreased coverage  0.0000432173  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_2742  CDS  NC_013173  3131470  3132357  -  888  hypothetical protein  YP_003159234  decreased coverage  0.00120775  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_2743  CDS  NC_013173  3132517  3134241  +  1725  single-stranded-DNA-specific exonuclease RecJ  YP_003159235  decreased coverage  0.00277097  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_2785  CDS  NC_013173  3166718  3167140  -  423  ribosomal protein L11  YP_003159277  decreased coverage  0.0000321602  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_2786  CDS  NC_013173  3167166  3167708  -  543  NusG antitermination factor  YP_003159278  decreased coverage  0.000144907  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_2867  CDS  NC_013173  3249396  3250697  -  1302  protein of unknown function DUF610 YibQ  YP_003159358  decreased coverage  0.00589273  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_2892  CDS  NC_013173  3272588  3273607  +  1020  glyceraldehyde-3-phosphate dehydrogenase, type I  YP_003159383  decreased coverage  0.00502813  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_3096  CDS  NC_013173  3505866  3507020  -  1155  DNA polymerase III, beta subunit  YP_003159587  decreased coverage  0.00256745  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_3451  CDS  NC_013173  3901448  3902209  -  762  Extradiol ring-cleavage dioxygenase class III protein subunit B  YP_003159939  decreased coverage  0.00000670941  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_3452  CDS  NC_013173  3902218  3903072  -  855  hypothetical protein  YP_003159940  decreased coverage  0.000000122936  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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Dbac_3453  CDS  NC_013173  3903090  3903668  -  579  NAD(P)H dehydrogenase (quinone)  YP_003159941  decreased coverage  0.000000456035  n/a    Desulfomicrobium baculatum DSM 4028  Bacteria 
 
 
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