Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1531 |
Symbol | |
ID | 8377200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 1737035 |
End bp | 1737550 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645000758 |
Product | UspA domain protein |
Protein accession | YP_003158040 |
Protein GI | 256829312 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00154671 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTGC CAGGCTTCAA AACTTTTCTA GTTCCTGTGA ACAACAGCGA ATCCGCCCGT CGCGCCAAGC GCTATGCCAT CGCATTGGCG AAACAATGCG GAGCGAAGGT CATCCTTTTC CACGCTCATG ACCTGATCAG CGGACGCATC AGCCCCAGCG GACGCGAAAT GATCATCCGC AAGAATCTCG AAGAGATGGG CAAGATTTTT GCCATCTTTG TCGAAGGCTG CCGGGAGGCC GGGGTGGAGT TTGAAATCGT AGTCGAGCAG GGCACTACGT CCGACGCGAT CATCAAGGCC GCCAGCGATC ATGACTGCGA CATGATCATC ATGGGCACCC AGGGTCATGC TTCCGCGCGA AAGATTCTCG GGTCCCTGTC GGACACGGTC AGCAAGCAAA GCTCCGTGCC CGTGGTCGTC GTGGGCGAGG AATGCGAATG CTCCAATTCC TGCGGAACAT CCTGCCAGAA CAAATGGCGT TTCGCACCCG TGCCCAATCT GCAGCACGCC TGCTGA
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Protein sequence | MKLPGFKTFL VPVNNSESAR RAKRYAIALA KQCGAKVILF HAHDLISGRI SPSGREMIIR KNLEEMGKIF AIFVEGCREA GVEFEIVVEQ GTTSDAIIKA ASDHDCDMII MGTQGHASAR KILGSLSDTV SKQSSVPVVV VGEECECSNS CGTSCQNKWR FAPVPNLQHA C
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