Gene Dbac_1735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1735 
Symbol 
ID8377407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp1976835 
End bp1977872 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content61% 
IMG OID645000963 
ProductRadical SAM domain protein 
Protein accessionYP_003158242 
Protein GI256829514 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 
TIGRFAM ID[TIGR00423] radical SAM domain protein, CofH subfamily 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00136048 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCC GCCTGAACAA GAACGAGGCC CGATACGTCT GGGATATGAA CGACGTCTTC 
ACTCTCGGGG GGCTCGCCCA CCAGCGTCGC ATGGAAATGC ATCCCGAGGG GATCGTCACA 
TATATTGTCG ACCGTAATAT CAATTACACC AATGTCTGCG TTTCCGCCTG CAAATTCTGC 
GCGTTTTTCA AGGGCCCGGG CGAGGAGGGC GGTTATGTCC TGTCCACGGA GGAGATTCTG 
TCCAAGGTGC AAGAGACCGT TGACCTCGGC GGATATCAGA TTCTGCTGCA GGGCGGGATG 
AATCCGGACC TGCCCCTAGG CTATTACACG GATCTGCTGC GCACGTTGAA GAGCCATTTT 
CCGGGTGTTG CCGTGCACGG GTTTTCACCC TCGGAGGTCT GGTATCTGAG CGAAAAAGAG 
TCCCGGCCCG TGGCCGACAT CCTGATCGAT CTGCGCCGGG CGGGGCTTGA TTCCATGCCT 
GGCGGCGGGG CCGAGATACT CAACGACGAG GTCAGGACCC GCGTCTCCCC GCGCAAATGT 
ACGGCGGATC AGTGGATTTC CGTCATGGAG ACGGCTCACG GCCTGGACAT GCGCACCACC 
GCGACCATGA TGCTCGGTCA GGGCGAAACT TTCGCGCAGC GCATGGAACA CCTCGACCGG 
CTGCGCGACC TGCAGGATCG CACTGGCGGT TTCACGGCCT TCATCCCCTG GACCTTCCAG 
CCCCGTAACA CGCGCATGGT CATGCCCGAA GCCTCGTCTC ACGAGTATCT CAAATTTCTG 
GCCCTGTGTC GCCTGTATCT GGACAACATT GGCAACATCC AGGCCTCCTG GGTCACCCAG 
GGTCCCATGG TCGGGCAGTT GGCCCTCTTT TGGGGCGCCA ATGATTTCGG CTCGACCATG 
CTTGAGGAAA ATGTCGTCGC GGCCACGGGC GTGCATTTCC TGCTGCCCGA ATCCCAGCTG 
CGCTCCCTGG TCGAGCGCGC GGGATTCACG CCCCGGCGGC GGAGCATGGA CTACACCCTG 
CGCGAGGAGG CCGTATGA
 
Protein sequence
MNTRLNKNEA RYVWDMNDVF TLGGLAHQRR MEMHPEGIVT YIVDRNINYT NVCVSACKFC 
AFFKGPGEEG GYVLSTEEIL SKVQETVDLG GYQILLQGGM NPDLPLGYYT DLLRTLKSHF 
PGVAVHGFSP SEVWYLSEKE SRPVADILID LRRAGLDSMP GGGAEILNDE VRTRVSPRKC 
TADQWISVME TAHGLDMRTT ATMMLGQGET FAQRMEHLDR LRDLQDRTGG FTAFIPWTFQ 
PRNTRMVMPE ASSHEYLKFL ALCRLYLDNI GNIQASWVTQ GPMVGQLALF WGANDFGSTM 
LEENVVAATG VHFLLPESQL RSLVERAGFT PRRRSMDYTL REEAV