Gene Dbac_2892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2892 
Symbol 
ID8378585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp3272588 
End bp3273607 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content62% 
IMG OID645002125 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_003159383 
Protein GI256830655 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00502813 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA CACGAATTGG AATAAACGGC TTCGGACGCA TAGGCAGGCA GGTGCTCAAG 
ACCATCTGGC AACGTCACCG CGACACCCTG GAAGTCGTGG CCATCAACGA TCTTTTCGAT 
ACGCAGACCA ACGCCCATCT GCTCCGACAC GATACGTCCT ACGGACATTT TGCGCCCACT 
GTGGAGGCCG ACGCCGACAC CATCCGGGTG GGCGGTGAAT GGGAAGTGAG AAGTTTCGCC 
CAGCGCGACC CGAGGCTCAT CCCCTGGAAG TCGTGCGGGG TGGACATCGT CATCGAATCC 
ACGGGCATCT TCCGCACCGG CCCGACAGCC GGCCAACACC TGGAAAGCGG CGCCAAGAAG 
GTCATCATCA CCGCGCCCTC CAAGGACGAG GACCTGACCG TGGTCATCGG CGTGAACGAG 
GACAAGTACG ACCCTGCCAT CCATCACATC GTCTCCAACG CTTCCTGCAC CACCAACTGC 
CTGGCTCCGG CGGTCAAGAT CATGCACGCC AAATTCGGCG TGGCCAAAGG CGTGCTGACC 
ACGGTTCACG CCTACACCAA CGACCAGCGC ATCCTCGATC TCCCGCACAA GGATCTGCGC 
CGGGCCAGGG CCGCAGCGTG CAACATGATC CCCACGTCCA CGGGCGCGGC CAAGGCCGTG 
GCCAAGGTCA TCCCCGAGAT GGCCGGACGC TTTGACGGCT ATTCGGTGCG CGTACCCGTG 
CCTGCGGTGT CCCTGGTGGA TTTCGTGGCC GTGCTCGAAC GCGACACGAC CGCCGAGGAG 
CTCAAGGCAG CCTTCAAGGA AGCCGCCGCC GGCGAACTCA AGGGGATACT GGGCTACTCC 
GAAGAAGCCC TGGTCTCCTC CGACTTCATC GCGGACCCGC ATTCGGGCGT GGTGGATGCT 
GATTTCACCA CGGTCCAGGC CGGAAACCTG GCCAAGGTGC TGATCTGGTA CGACAACGAA 
TGGGGGTATT CCTGCCGCGT GGCCGACCTG GCCCATCTCA TGGCGCAAAA GGGTCTTTGA
 
Protein sequence
MEKTRIGING FGRIGRQVLK TIWQRHRDTL EVVAINDLFD TQTNAHLLRH DTSYGHFAPT 
VEADADTIRV GGEWEVRSFA QRDPRLIPWK SCGVDIVIES TGIFRTGPTA GQHLESGAKK 
VIITAPSKDE DLTVVIGVNE DKYDPAIHHI VSNASCTTNC LAPAVKIMHA KFGVAKGVLT 
TVHAYTNDQR ILDLPHKDLR RARAAACNMI PTSTGAAKAV AKVIPEMAGR FDGYSVRVPV 
PAVSLVDFVA VLERDTTAEE LKAAFKEAAA GELKGILGYS EEALVSSDFI ADPHSGVVDA 
DFTTVQAGNL AKVLIWYDNE WGYSCRVADL AHLMAQKGL