| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1248 |
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| Symbol | |
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| ID | 8376913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 1377469 |
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| End bp | 1377996 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645000481 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003157767 |
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| Protein GI | 256829039 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00404625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA TCATCATCAC TGCTTCGTTG ATTTTTTCCA TCATTCCCTG TGCGGCGAAT
GCTGATTTTC TGGGAGCCTT CGACTCCCTT GTCGAGATGT TTCGTGTGAA TACGTTCTCT
GAAAAAAAAT ATAAGCCACA AAGAAATAAT AAAAACGTAT ATTGGAATAT AATTGTCGAT
GCATCTAGGC ACTATGACGT CGACCCTTAT ATCATTCATT GTGTGATCAA ACACGAGTCG
TATTTTGATA AGAATGCGGT TTCTCATAAG GGTGCTATCG GACTCATGCA GCTCATGCCT
GGTACGGCGA AGTCACTTGG GGTTGTAGAC CCGTATAATC CTGTTCAAAA TATCTATGGC
GGAACACTGT ATCTCAGAAA GATGCTGTAC ATGTTCGATA ATGACTTGCG TTATGCACTT
ATGGCATACA ACGCCGGCCC TGGACGGGTG AAAAGAAACT CCATTCCAAA AGTTTCTTAT
GCTTATGCAG ACAGAATTAT TCGCGATTAC AACGCTATGA GGCGATAA
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| Protein sequence | MKKIIITASL IFSIIPCAAN ADFLGAFDSL VEMFRVNTFS EKKYKPQRNN KNVYWNIIVD
ASRHYDVDPY IIHCVIKHES YFDKNAVSHK GAIGLMQLMP GTAKSLGVVD PYNPVQNIYG
GTLYLRKMLY MFDNDLRYAL MAYNAGPGRV KRNSIPKVSY AYADRIIRDY NAMRR
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