Gene Dbac_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0339 
Symbol 
ID8375987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp397813 
End bp398469 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content46% 
IMG OID644999580 
ProductTrkA-N domain protein 
Protein accessionYP_003156882 
Protein GI256828154 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00738023 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGTT TCGCGGTAAT AGGCTTGGGC AATTTTGGTT TTCATGCAGC CAAAGCCCTC 
TTTGAAGAGG GTAACGAAGT GCTCGCCATG GATACAGACA GGGTAAGGGT TCAAGCCATT 
GATCCGTATT CTACCGAAGC AATGGTGATC GATGCTACCG ACAAGGAGGT TTTGAAATCA 
TTATGCTTGG AAGAGATGGA TGCAGTGATT GTTTCAACAG GAACGAAAAT AAGCAACAGC 
ATTCTCATTT GCCTTCATTT GCTGGAGTCT GGAGTGAAGA AAATATTGGC CAAGGCTCTT 
GATGATGACC ATGCCAAGAT TCTCAAACGA ATGGGAGCCA CCGAAATCAT TCATCCGGAA 
AGGGATATGG CGATCAGGGT CTCCCGTAAC CTTTCAAGAC CGAATGTTCT GGATTTCATT 
CCGCTGGCTG AAGAGTTCGA CATGATTCAA GTGGGCGCCC CCAGAGATTT CGTTGGGAAA 
TCCTTGATCG ATCTGAACTT ACGGGCGCGG TATAATGTTC ACGTCATTGC GATAAAAGAA 
GTGGTTCCGG AAAATTTCAT CCTCGTCCCC CCGGCGGATT ACGTTCTCAA AGATAGCGAT 
ATCCTGGTCA TGCTTGGCAG ATCTGCGGAT ATAAGGAAGA TCAAGGAGCT AAAATGA
 
Protein sequence
MKRFAVIGLG NFGFHAAKAL FEEGNEVLAM DTDRVRVQAI DPYSTEAMVI DATDKEVLKS 
LCLEEMDAVI VSTGTKISNS ILICLHLLES GVKKILAKAL DDDHAKILKR MGATEIIHPE 
RDMAIRVSRN LSRPNVLDFI PLAEEFDMIQ VGAPRDFVGK SLIDLNLRAR YNVHVIAIKE 
VVPENFILVP PADYVLKDSD ILVMLGRSAD IRKIKELK