| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2743 |
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| Symbol | |
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| ID | 8378427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 3132517 |
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| End bp | 3134241 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645001968 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_003159235 |
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| Protein GI | 256830507 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00277097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATA CCCAGGCCGA CTGGAAACTA AAAACTCCTG CCCCCGAAGC AGAACTCAGC
GTTGCTCAGC AAAGAGGCAT CGCCGAACGG CTTGAAGTGA GCCCCCTGCT GGTTCACTTG
ATGTCCCTGC GCGGTCTGGC CTGTGAATCC GACATGGACA AATTCCTGAG CCCCGGGCTT
CGCTACCTGC ATCCGCTGGA CAAATGGCCC GGCATCGAAG CAGGTGCGGC CCTGATCTGC
GCCGCGGTGA AGGAAAACCG CAGGATCGCG GTCTGGGGCG ACTACGATGT GGACGGAATT
ACCGCCACGA CGCTGGTCAT AGACTTCATG GCCCGCCGGG GCGTCGAGGT GAGCCATTAC
ATCCCCGACA GGCTTGACTT CGGTTACGGG CTGCATGTCG ACGGCATCCG CGAACTGGCG
GCCCAGGGTG TCGGTCTCCT GCTGACCGTC GATTGCGGCA TCGCCAACAT CGAAGAGATT
CGAGAAGCCA AGGCGCTGGG GATGCACGTC ATCATCACCG ACCATCACCT GCCCGGCCAG
GACCTGCCCG AGGCCGAGGT CATCATCAAC CCCAAGCTCG AGGGCTGGCC CACTCCCAAC
CTCGCCGGGG TCGGAGTGGC TTTTCTGCTC ATGGGCGCGG TAAACCGTCT CCTCCCCGGG
GCCGCGGTGG ACATCCGCGA TTTCCTGGAC CTGGTCGCCC TGGGCACAGT CGCCGACGTT
GTCCCCCTGG ATGAACAGAA CAGAATCCTG GTCAAAAACG GGCTTCTGCT GATCAAGGAA
GGCCGCCGTC CCGGCATCCA GGCCCTCAAG GAAATCAGCG GACTTGGACC TGACGACAAC
GTGGGTACAG GCTCCATCGG CTTCGCCCTG GCGCCCCGCA TCAATGCCGC CGGCCGCATC
GGCGACCCGG ACCTCGCCGT ACGCATGCTC TTGGCGACAG ACCCGGAGGA AGCACGGCAG
CTGGCCACGA AACTCGACAA ACTCAACGCC AAACGCAAAC TCGAAGAGCA GCGCATCCTG
GAAGAAGCCA TCACCCAGGC CGAGTCACAG CTTCACCTGC CCGGCCTCGT GCTGCATTCC
GAACACTGGC ACTCAGGCAT CATCGGCATC GTGGCCTCGC GCATCGTGGA GCGCTTTCAT
CGCCCGTGTC TGATCCTGAC CAAAGAAAAC GGAATCTTCA AAGGCTCGGG CCGCTCCACC
CCCACCTTCG ACTTGTATCA GGCCCTCCTG TCCTGCAAAC AGTGCCTCTA CAAATTCGGT
GGCCACCGGC AGGCCGCAGG GCTGAAACTC GAACCATTCC AACTGGCCAA TTTGAAAAAT
CTTTTTGCCT GGGCCGTGGA AGAGCAACTG GGCGCAAACC CGGCCCCGCC AGTCCTGGAA
CTGGACGCGG AACTGCCCTT TGCCTTGATC ACGGCCACGT TGCTCAAAGA ACTTGAACTC
CTGCAGCCCT ACGGCCAAGG AAACCCGAGG CCCATTTTCC TTTCCCCGCC GCTAAGCATC
CTCAAACATC GTTTTTTCAG TCAAAAGAAA CACTTGGAGC TGCATTTGTC CGACTCCAGC
GACGGAACGA ACATGCGCGC CGTGGCCTGG AGACAGGGAG AACGCTGGCA GGATGCATCT
TTTACGGGCA AACAGATCAA GATCGCCTAC ACTCCGCGGC TGTCGAAATT CAATGGACTG
CAACAGATCG AGCTGGCCGT GCAGGACATC CTGTCTTTGG AATAA
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| Protein sequence | MSDTQADWKL KTPAPEAELS VAQQRGIAER LEVSPLLVHL MSLRGLACES DMDKFLSPGL
RYLHPLDKWP GIEAGAALIC AAVKENRRIA VWGDYDVDGI TATTLVIDFM ARRGVEVSHY
IPDRLDFGYG LHVDGIRELA AQGVGLLLTV DCGIANIEEI REAKALGMHV IITDHHLPGQ
DLPEAEVIIN PKLEGWPTPN LAGVGVAFLL MGAVNRLLPG AAVDIRDFLD LVALGTVADV
VPLDEQNRIL VKNGLLLIKE GRRPGIQALK EISGLGPDDN VGTGSIGFAL APRINAAGRI
GDPDLAVRML LATDPEEARQ LATKLDKLNA KRKLEEQRIL EEAITQAESQ LHLPGLVLHS
EHWHSGIIGI VASRIVERFH RPCLILTKEN GIFKGSGRST PTFDLYQALL SCKQCLYKFG
GHRQAAGLKL EPFQLANLKN LFAWAVEEQL GANPAPPVLE LDAELPFALI TATLLKELEL
LQPYGQGNPR PIFLSPPLSI LKHRFFSQKK HLELHLSDSS DGTNMRAVAW RQGERWQDAS
FTGKQIKIAY TPRLSKFNGL QQIELAVQDI LSLE
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