| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1451 |
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| Symbol | |
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| ID | 8377116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 1640442 |
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| End bp | 1642304 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645000675 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_003157961 |
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| Protein GI | 256829233 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000215899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCAGAA CGCTGATCAT AGCCGAAAAG CCCTCCGTGG CCCGCGAGCT GGCAGGTGTC
CTTGGCGTCA AGGGACGCGG GGACGGCTTT CTGCAAGGTC CGGGACACAT AGTCACCTGG
GCCGTTGGGC ATCTGGTCAA CATCGCCGAA CCGGCCGAAC AGAACCCGGC ATGGTCCGGC
CGCTGGTCCA TGCGCCAATT GCCCATGCTG CCTTCGCGTT TCACCCTGGG AATTCTTCCG
TCCACGGCCA AGCAGTACGA AATTATCCGC AATTTCCTGC TCGACGACGA TATCGATTCC
GTCGTTAACG CCACGGACGC GGGCCGGGAG GGGGAACTCA TCTTTCGCCG TATCTACCTG
CTGGCCGGAA GCACCAAGCC GATAAAACGC CTCTGGGCCA ACGACATGAC CGAAAAAGGT
CTGCAAAAGG CTTTCGCCGG CATGGTCAGC GGAGAGGAAA AAAGAAATCT GGGGCACGCC
GCCTTTGCCC GAGCCGAGGC CGACTGGCTG GTGGGCATGA ATTTCTCCCG TCTCTTCACC
TTGCGCGCGG GCAGCCTGAT CACTGTCGGG CGGGTGCAGA CGCCGGTTCT CAAACTACTG
GTTGAACGCA GGCGCGAGAT TGAAAACTTC CTGCCTCGGG ATTACTGGAC CGTGGAAGGC
GAGTTCGCGC ACGAGGGTGA GACGTTCAAG GCGACCTGGT TCGCGGCTCC GGATTTCAAG
GACTCCAAGA TCTGGCAGGT GGAGGAAGGG CAGACCGTGG TCCAGGCCTG CGCCGGAAAG
GATGGGGCGG TTCTTGAAAT GGAAAAGAAG AAGGGCAGAC AAAAACCGCC CCTGCTCTTC
GACCTGACCA ATCTGCAGAA AGAAGCCAAC TCGCGGCTTG GTTTTTCGGC CCAGCAGACG
CTCTCCATCG CCCAGGACCT CTACGAAAAA AGAAAGCTCA TCACCTATCC GCGAACGGAT
TCCAGGTATC TGACCAAAGA GCTTTTCGCC GAATGCCTGG AGAACATGCG CGCGGTCTAC
GCCCATTTTC CCGAAATTTC GCAGTCGGCC GCAGCCAACA TCAAGGACGC AAAGAAGAAA
TTCGAATGCG TCAACGACAA GAAGGTCTCG GATCACCACG CCATCATCCC CACAACCCTG
CGCGCCAATC CGGCGACGCT GGGCAAAGAG GAGTGGGCCA TCTATGAAAT GATCTGCAGG
CGTTTCGCGG CGGCCTTCAT GGATGACGCC ACCTTTGCCA GCTCAACGCT GTGGATCGGG
GTGGAAGGGC ATCGCTACCG GGCCACGGGC AAGATATTCC AGGACAAGGG CTGGCTTGAG
GCCGAGCCCT GGCGCGCGTC CGAGGACAAC CCCCTGCCGA ACCTGCGCAA GGGCGCGGCC
GTCACGGCGC AGAGCCTTGA TCTGGTCGCG CACAAGACCA AGCCCCCGGC GCATTTCACC
GATGCCACGC TGCTGGCGGC CATGGAGACG GCGGGCAAGC TGATCGATGA CGAAGAGCTC
CGGGACGCCA TGAAAGAGCG CGGCCTCGGC ACCCCGGCCA CCCGCGCCCA GATCATTGAA
ACCCTGCTCG CCAGGAAGTA TATCGGCAAG GACGGCAAGC GTCTCGTGGC CACGGATCTC
GGCTGCTGGG CGGTGGACGT GGTCTGCTCC ATGATTCCAC AGGTGGCGTC TCCCGAACTG
ACCGGCGAGT GGGAAAAACG GCTCAAAGAA ATGGAGCAGG GCGGCTATGC CTACGGCGTC
TTCATGCATC AGGTCCGGGA AATGGTCAGT TCCGGAGTGA GCCGGGTCAA GGGCAGCAAC
GCACGGCCCC CGGCCTGCCC GGTGGTTTCG GACAGAAAGC CCAGCAAAGA GGTGAACTCA
TGA
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| Protein sequence | MPRTLIIAEK PSVARELAGV LGVKGRGDGF LQGPGHIVTW AVGHLVNIAE PAEQNPAWSG
RWSMRQLPML PSRFTLGILP STAKQYEIIR NFLLDDDIDS VVNATDAGRE GELIFRRIYL
LAGSTKPIKR LWANDMTEKG LQKAFAGMVS GEEKRNLGHA AFARAEADWL VGMNFSRLFT
LRAGSLITVG RVQTPVLKLL VERRREIENF LPRDYWTVEG EFAHEGETFK ATWFAAPDFK
DSKIWQVEEG QTVVQACAGK DGAVLEMEKK KGRQKPPLLF DLTNLQKEAN SRLGFSAQQT
LSIAQDLYEK RKLITYPRTD SRYLTKELFA ECLENMRAVY AHFPEISQSA AANIKDAKKK
FECVNDKKVS DHHAIIPTTL RANPATLGKE EWAIYEMICR RFAAAFMDDA TFASSTLWIG
VEGHRYRATG KIFQDKGWLE AEPWRASEDN PLPNLRKGAA VTAQSLDLVA HKTKPPAHFT
DATLLAAMET AGKLIDDEEL RDAMKERGLG TPATRAQIIE TLLARKYIGK DGKRLVATDL
GCWAVDVVCS MIPQVASPEL TGEWEKRLKE MEQGGYAYGV FMHQVREMVS SGVSRVKGSN
ARPPACPVVS DRKPSKEVNS
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