| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1983 |
|---|
| Symbol | |
|---|
| ID | 8377657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2276097 |
|---|
| End bp | 2276681 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 645001209 |
|---|
| Product | Fimbrial assembly family protein |
|---|
| Protein accession | YP_003158487 |
|---|
| Protein GI | 256829759 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3166] Tfp pilus assembly protein PilN |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00407145 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAA TTAATTTACT TCCTCAGCAA AAGCGAACTA AAACAACAAA CATTGAAAAA
AGTTTTGTTT TTTTCGTGTT AGGGGTCCTG TTGGTGCTGG GATCCGTTTT TGCCGTAGAC
TACTTTTTTT CTTCTCAACT AGCGGAATTG AATGCGTCAG TATCTAAAAA AACGCAGACA
AAGACGCTTT TGGAAAAAGA AGTAGCAAAG GTGAATCAAA CCATACAAGA ACTTCAGGAT
ATCGATGGAA GGATCAAGAT CATCAAGCAA GTTCGCCTTC GCCAAGGATT GCCGGTCAAA
TATATTGATG AGGTCGTCAT CAATATTCCG CAGAATAAAT TATGGTTTGA AAAATTCAAT
GTTGACGCCA ATGGCAACAT TGCCCTCAGC GGAGTCGCAT TGGATAATCA GGCTTTTGTG
AGCTTCGTTG AACGGCTTCG TCTGTCGAAA TATATTGCCA GTGTGGACAC GCGAAGGACC
TCTCGTCGCG AAATTGACGG GCTTGGCCTG GTTTCCTTCG AATGTTCTGT CAAGGCCCAG
GAGTATTTCG AGAACATAAG TACGAATGGA ACAACAAATG GATAA
|
|---|
| Protein sequence | MIKINLLPQQ KRTKTTNIEK SFVFFVLGVL LVLGSVFAVD YFFSSQLAEL NASVSKKTQT
KTLLEKEVAK VNQTIQELQD IDGRIKIIKQ VRLRQGLPVK YIDEVVINIP QNKLWFEKFN
VDANGNIALS GVALDNQAFV SFVERLRLSK YIASVDTRRT SRREIDGLGL VSFECSVKAQ
EYFENISTNG TTNG
|
|---|
| |