Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2101 |
Symbol | |
ID | 8377776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 2408682 |
End bp | 2410718 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645001325 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_003158602 |
Protein GI | 256829874 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.007905 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAGTG ATGCCGGAGA GCCGCGGGCC TTTTACCAGC TTTTTGCCGA TCTGGCCTCG GGAACTCTTG AGCATGTGAC GGATCCGGTG AAGTGCGCCG AGTATGTGGC GTCGCAGGTC CGGGAGCTTC TGGGGGTAAA GGCCGTGGCC GTGGTCGCCT GTCAGGGGCA CGGAAGTCCG CATCGCCTTT TGGCCGTGCG TCCCTTGCGG CAGGAGGCAT TGTTCAAGAA GGACGCGGTC GAACAGCTTA TCCATGCCAG TCATGCTTCG CATCTGGCCA TGACCGTGAG CCCGGAGGAC CGGACCGTGT CCGGCGAATT GCTGCGTTCA CTTGGCCTGT CGGATTCCGT GATCGTGCCG CTGCGCGTTG GCAGTGAAGT GATCGGCGCC CTGGTTTTGC TTGGACTCAT GGACACCTGC GGCATTGAGA CCATTGTTCA CAGTCTTGAC CGTCTGTCCT CGTTGTTGGC CCTGATCATG CGTCAGGCCG ATCAGTACCG GGATCTGGAG CTGGCCGTGC GGGAGCGCAC CGCCGAGCTG CAGGCCACTC GCGACCGGCT GGAAGAGCAG CACGCCTTCC TGTCATCCCT GCTTTCAAGT TTGCCCAACC CCGTGTTCGT GCAGGACATT CACGGCCGGA TTCTGCGATG CAACGATGCT TTCAGCGCAT TGGTCGGAAA GTCCGGGCAG GAGCTTGTCG GCGAGCATGA ATCCCGGCTT CGGGACTCCT TTGTTCTGGA GCCGGCCAAA AATGAGGGGC TGGGGCCGGA CGAGTTTGAA TGCCGCGCGG CGGACGGCTG CATGCGCCGC ATGCTGTCTT CCTGCGCGCC GTTTCATACC AGTCAGGGTC AACTGGCCGG GTTCATAAAC GTGCTGACCG ATGTCTCGGA TCTGGCCGCG GCGCGGCGCG CCGCCGAAGC CTCCAGCCGC GCAAAGTCGG AGTTTCTGGC CAACATGAGC CATGAGGTCC GCACTCCATT GAACGGCATC GTCGGCATGC TGCAGCTCTT GAGTCACACG TACCTGGATG CGGAGCAGAA GGAGTTTGTG TTCACGGCCA TCCGCTCATC CAAACGGCTG ACCCAGCTCC TGACCGACAT CCTCGAAATT TCACGCATCG AGGCAGGCAA GCTGGACGTT GTCGCTCAGG AATTTCATTT CGTGGACCTG CGCGACTCCG TGCGCGACCT CTTTGTCATC CCGGCCAAGG CCAAAGGGCT TGAGCTCTCG TTTGAGATCG ACGAGGCCAT CCCTTCGCAT GTGGTGGGCG ACGAGGGCCG TCTGCGGCAG ATTCTTTTCA ATCTGGTCGG CAACGCCACG AAGTTCACGC CCCGGGGCAG CGTTCAGGTC ACGGCCCGGC GACTGGACCA GGGTGGACAG ATGCACGTCG AATTCACGGT CCAGGACACA GGTGTCGGCA TCCCCCGGGA GCGGCAGGAG GACATATTCA ACGCCTTCAC CCAGGTCGAT GGTTCGGCCG TGCGCCAGCA CGGAGGCGTT GGGCTGGGCC TGGCCATAGT CAGGCGCCTG GTGGACATGA TGGATGGGAC GATAACGGTT CAGAGCGAGC CCGGCCACGG CACGACCATG ACCGTCAGGG TTCCGCTGCT TCCCGGCCGG TCGGTGTGTG AGAATCTTGA AGAGCCTCCG CTGCCGGAGG TCCGGGACAA GCACGTCCTG GTGGTGGAGG ATGACCCGGT CAACCAGTTG GCCCTGACCC GGATGCTCAG AAAGCTTGGC CATTATTCGA CGCTGGCCCG CAATGGCCAG GAGGCCCTCG ACCTGCTGGC GCTGGAGGAT TTCGATTGCG TGCTCATGGA CATCCAGATG CCGATCATGG ACGGACTTGA AGCCACCAGC CGAATCCGTT CCGGCTCCAT CGGCCGCGTG TCTCCTGAAA TTCCGGTCAT CGCCCTGACC GGACACGCCA TGCCGGGAGA CCGGGAGCAT TTTATGGCCT GCGGCATGAC GGCGTATCTT TCCAAACCTG TGGACATGAA TTCACTGTCT CGCCTCATCG CACAGCTTAC ATCCTGA
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Protein sequence | MHSDAGEPRA FYQLFADLAS GTLEHVTDPV KCAEYVASQV RELLGVKAVA VVACQGHGSP HRLLAVRPLR QEALFKKDAV EQLIHASHAS HLAMTVSPED RTVSGELLRS LGLSDSVIVP LRVGSEVIGA LVLLGLMDTC GIETIVHSLD RLSSLLALIM RQADQYRDLE LAVRERTAEL QATRDRLEEQ HAFLSSLLSS LPNPVFVQDI HGRILRCNDA FSALVGKSGQ ELVGEHESRL RDSFVLEPAK NEGLGPDEFE CRAADGCMRR MLSSCAPFHT SQGQLAGFIN VLTDVSDLAA ARRAAEASSR AKSEFLANMS HEVRTPLNGI VGMLQLLSHT YLDAEQKEFV FTAIRSSKRL TQLLTDILEI SRIEAGKLDV VAQEFHFVDL RDSVRDLFVI PAKAKGLELS FEIDEAIPSH VVGDEGRLRQ ILFNLVGNAT KFTPRGSVQV TARRLDQGGQ MHVEFTVQDT GVGIPRERQE DIFNAFTQVD GSAVRQHGGV GLGLAIVRRL VDMMDGTITV QSEPGHGTTM TVRVPLLPGR SVCENLEEPP LPEVRDKHVL VVEDDPVNQL ALTRMLRKLG HYSTLARNGQ EALDLLALED FDCVLMDIQM PIMDGLEATS RIRSGSIGRV SPEIPVIALT GHAMPGDREH FMACGMTAYL SKPVDMNSLS RLIAQLTS
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