Gene Dbac_2101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2101 
Symbol 
ID8377776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2408682 
End bp2410718 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content62% 
IMG OID645001325 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_003158602 
Protein GI256829874 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.007905 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAGTG ATGCCGGAGA GCCGCGGGCC TTTTACCAGC TTTTTGCCGA TCTGGCCTCG 
GGAACTCTTG AGCATGTGAC GGATCCGGTG AAGTGCGCCG AGTATGTGGC GTCGCAGGTC
CGGGAGCTTC TGGGGGTAAA GGCCGTGGCC GTGGTCGCCT GTCAGGGGCA CGGAAGTCCG
CATCGCCTTT TGGCCGTGCG TCCCTTGCGG CAGGAGGCAT TGTTCAAGAA GGACGCGGTC
GAACAGCTTA TCCATGCCAG TCATGCTTCG CATCTGGCCA TGACCGTGAG CCCGGAGGAC
CGGACCGTGT CCGGCGAATT GCTGCGTTCA CTTGGCCTGT CGGATTCCGT GATCGTGCCG
CTGCGCGTTG GCAGTGAAGT GATCGGCGCC CTGGTTTTGC TTGGACTCAT GGACACCTGC
GGCATTGAGA CCATTGTTCA CAGTCTTGAC CGTCTGTCCT CGTTGTTGGC CCTGATCATG
CGTCAGGCCG ATCAGTACCG GGATCTGGAG CTGGCCGTGC GGGAGCGCAC CGCCGAGCTG
CAGGCCACTC GCGACCGGCT GGAAGAGCAG CACGCCTTCC TGTCATCCCT GCTTTCAAGT
TTGCCCAACC CCGTGTTCGT GCAGGACATT CACGGCCGGA TTCTGCGATG CAACGATGCT
TTCAGCGCAT TGGTCGGAAA GTCCGGGCAG GAGCTTGTCG GCGAGCATGA ATCCCGGCTT
CGGGACTCCT TTGTTCTGGA GCCGGCCAAA AATGAGGGGC TGGGGCCGGA CGAGTTTGAA
TGCCGCGCGG CGGACGGCTG CATGCGCCGC ATGCTGTCTT CCTGCGCGCC GTTTCATACC
AGTCAGGGTC AACTGGCCGG GTTCATAAAC GTGCTGACCG ATGTCTCGGA TCTGGCCGCG
GCGCGGCGCG CCGCCGAAGC CTCCAGCCGC GCAAAGTCGG AGTTTCTGGC CAACATGAGC
CATGAGGTCC GCACTCCATT GAACGGCATC GTCGGCATGC TGCAGCTCTT GAGTCACACG
TACCTGGATG CGGAGCAGAA GGAGTTTGTG TTCACGGCCA TCCGCTCATC CAAACGGCTG
ACCCAGCTCC TGACCGACAT CCTCGAAATT TCACGCATCG AGGCAGGCAA GCTGGACGTT
GTCGCTCAGG AATTTCATTT CGTGGACCTG CGCGACTCCG TGCGCGACCT CTTTGTCATC
CCGGCCAAGG CCAAAGGGCT TGAGCTCTCG TTTGAGATCG ACGAGGCCAT CCCTTCGCAT
GTGGTGGGCG ACGAGGGCCG TCTGCGGCAG ATTCTTTTCA ATCTGGTCGG CAACGCCACG
AAGTTCACGC CCCGGGGCAG CGTTCAGGTC ACGGCCCGGC GACTGGACCA GGGTGGACAG
ATGCACGTCG AATTCACGGT CCAGGACACA GGTGTCGGCA TCCCCCGGGA GCGGCAGGAG
GACATATTCA ACGCCTTCAC CCAGGTCGAT GGTTCGGCCG TGCGCCAGCA CGGAGGCGTT
GGGCTGGGCC TGGCCATAGT CAGGCGCCTG GTGGACATGA TGGATGGGAC GATAACGGTT
CAGAGCGAGC CCGGCCACGG CACGACCATG ACCGTCAGGG TTCCGCTGCT TCCCGGCCGG
TCGGTGTGTG AGAATCTTGA AGAGCCTCCG CTGCCGGAGG TCCGGGACAA GCACGTCCTG
GTGGTGGAGG ATGACCCGGT CAACCAGTTG GCCCTGACCC GGATGCTCAG AAAGCTTGGC
CATTATTCGA CGCTGGCCCG CAATGGCCAG GAGGCCCTCG ACCTGCTGGC GCTGGAGGAT
TTCGATTGCG TGCTCATGGA CATCCAGATG CCGATCATGG ACGGACTTGA AGCCACCAGC
CGAATCCGTT CCGGCTCCAT CGGCCGCGTG TCTCCTGAAA TTCCGGTCAT CGCCCTGACC
GGACACGCCA TGCCGGGAGA CCGGGAGCAT TTTATGGCCT GCGGCATGAC GGCGTATCTT
TCCAAACCTG TGGACATGAA TTCACTGTCT CGCCTCATCG CACAGCTTAC ATCCTGA
 
Protein sequence
MHSDAGEPRA FYQLFADLAS GTLEHVTDPV KCAEYVASQV RELLGVKAVA VVACQGHGSP 
HRLLAVRPLR QEALFKKDAV EQLIHASHAS HLAMTVSPED RTVSGELLRS LGLSDSVIVP
LRVGSEVIGA LVLLGLMDTC GIETIVHSLD RLSSLLALIM RQADQYRDLE LAVRERTAEL
QATRDRLEEQ HAFLSSLLSS LPNPVFVQDI HGRILRCNDA FSALVGKSGQ ELVGEHESRL
RDSFVLEPAK NEGLGPDEFE CRAADGCMRR MLSSCAPFHT SQGQLAGFIN VLTDVSDLAA
ARRAAEASSR AKSEFLANMS HEVRTPLNGI VGMLQLLSHT YLDAEQKEFV FTAIRSSKRL
TQLLTDILEI SRIEAGKLDV VAQEFHFVDL RDSVRDLFVI PAKAKGLELS FEIDEAIPSH
VVGDEGRLRQ ILFNLVGNAT KFTPRGSVQV TARRLDQGGQ MHVEFTVQDT GVGIPRERQE
DIFNAFTQVD GSAVRQHGGV GLGLAIVRRL VDMMDGTITV QSEPGHGTTM TVRVPLLPGR
SVCENLEEPP LPEVRDKHVL VVEDDPVNQL ALTRMLRKLG HYSTLARNGQ EALDLLALED
FDCVLMDIQM PIMDGLEATS RIRSGSIGRV SPEIPVIALT GHAMPGDREH FMACGMTAYL
SKPVDMNSLS RLIAQLTS