| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1070 |
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| Symbol | |
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| ID | 8376732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 1175751 |
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| End bp | 1178462 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645000311 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_003157599 |
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| Protein GI | 256828871 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00103612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAA ATAAAGATAT AACAACAAAC TGGCACCAGC TTGGCCAAGC TGCGGTCGTA
CAGAAACTGC AATCGTCCGA GATGGGCCTT GCTTCAGAAG AAGCGGGCCG CCGCTATGAC
CAATACGGCC CCAACGAATT AATCGAGAAG GGAAGGAAAA AGCCCTGGCG GATTCTGTTG
GCACAGGTGA AGGAGGTCAT GATCCTGATT CTGTTGGCAG CCGTGGTCAT TTCGGCGGCA
CTGCAGGAAT ATATCGATGC CATCGTGATT TTTGTCATTG TGGTGCTCAA TACGCTGCTG
GGGTTTTGGC AGGAGTTCAA GGCCGAAAAC GCCATGGCGG CCCTCAAGAA AATGACGGTG
CCCAACGTGC GGGTGCGGCG CGACGGCGCA GAGCAGCAGA TTTCGGCCAA GGACCTGGTG
CCCGGAGACA TCCTGCTCAT CGAAGCCGGA AACATCGTCC CGGCCGATGC CCGACTGATC
GTCGCCGCAA ATCTCAAAGT CCAGGAAGCG GCTCTGACCG GAGAATCCGA ATCGGTGGAC
AAAGATACCG GCGAACTGCC GGACGCCGAG CTTGCCTTGG CCGACCGCAA AAACATGATC
TACAGGGGCA CGGTGGTGAC CTACGGGCGC GGCGAAGCCG TGGCCACCGC CACCGGCATG
CAGACCGAAT TGGGTAAAAT CGCCACCATG CTCCAGGACG TGGAGGACGA ACAAACTCCG
CTGCAGGAGC GGTTGGCGAA GCTCGGCCGA TCCTTGGCCA TGGCCGCCGG GGTGCTGATC
GTCATCGTCG CCGGCATGAC CTATCTGCAG GGCGCGGGCG TCAAGGAAAT ATTCATGACT
GCCATCAGCA TGGCGGTGGC CGCCGTCCCC GAAGGCCTGC CGGCAGTCGT GACCATCGCC
CTGGCCCTGG GCGCGCAGCA GATGCTCAAA AAGAATGCGC TCATCCGGCA ACTCCCGGCC
GTGGAAACCC TAGGCGGAGT GACCGTGATA TGTTCCGACA AAACCGGCAC GCTGACGCAG
AATAAAATGA CCGTATCGGA CGTGGTCCTG CCGGATCGCC GTTATACCCT GAGTGAGGCG
GCGGCCCGAC ACGGCGAGGA TGCGGATCTC GGTCTGCTCT TGCTGACCGG GACGCTGTGC
AACGATGCAG TCATCGACGA AAGTGCGCCA AACGGCATTC TCGGCGATCC CACCGAAGGC
GCACTGGTGC TTGCGGCCCA CCAGGCGGGA CTGGTCCAGC GCGATCTGCA GGCCATATTG
CCGCGCGTGC GCGAACTGCC CTTTGATTCC GAGCGCAAGC GCATGTCCAC CGTCCACGCC
CTGCCTTCGT CTTCCCAGAG GGCAACGTTG CACCCTGTTC TTGCCGCCGG AGATCAGGCG
CAAGCCGATC ATCTGGTGTT GGTCAAGGGG GCCACCGATG GATTGATCGA GGCGTGCGGC
CGGATTCTCG TCAGCGGCGT CGTCCACCCG CTTGACGAAA GAAAAAAAGC GGAGATTTCA
GCCGAAAACA CCGCCATGGC AAAAAACGGC CTCCGGGTGC TTGGTTTGGC CTATCGGCTG
CTGGATGTCG ACGAGTTGGA TCAACCGGAC CGCTATGAGC ACGATCTGGT TTTTCTGGGC
ATGGTCTGCA TGCTCGATCC GGTGCGTCCC GAGGCGATTG AGTCCGTCAG GCTGTGCAAG
CAGGCCGGGA TTCGTCCGAT CATGATCACC GGCGACCATC CCCTGACGGC TGTCGCCATC
GCCAAGAATT TGGGGCTGAC CACTCTTGAT ACGGTCCTGA CCGGGAAGGA TCTGGACGCG
ATGACCGTCG ATGCGCTCGC GGCCCGAATC AAGGATGTTT CCGTGTTTGC GCGCGTCTCT
CCAAAGCATA AGATGATCAT CATCGACGCG CTGCAAGCAC AGCACGAGAT CGTCTCCATG
ACCGGCGACG GCGTCAACGA CGCGCCGGCG CTGAAATCCG CCGACATCGG CGTGGCCATG
GGAATTACGG GGACCGACGT CAGCAAGGAA TCCTCCGATA TGATCCTGCT GGACGACAAT
TTCGCCACCA TCGTCGCCGC CGTCAAAGAA GGCCGCCGCA TTTACGACAA TATCCGCAAA
TTCGTCAGGT ACATCCTCAC CGGCAACGCA GGTGAAATCG TTGTCATGAT TGCCGGGCCG
CTCATGGGCA TGCCGCTGCC CTTGCTGCCG ATTCAGATTT TATGGATCAA TCTGGTGACC
GATGGCGTAC CGGCCGTGGC CTTGGGGTTC GAAGAAGCCG AGCGCGATGT GATGAACCGG
CCGCCCTACG ATCCGCAGGA AGGCATTTTC GCGCGCGGGC TGGGCTGGCA GATTCTCGTC
ATGGGCCTGA TTGTAGGCCT GATCTCGGTG GGGACAGGGT ACTGGTTCTG GGACGGCGGA
GAAGGCTCAA CGGCCTGGCA GACCATGGTC TTCACCATGC TGACGTTCTG CCAGATGGCC
TATGCGCTGT GCGTGCGCAA AAAAACGCAA TCGCTGTTTT CGCGATCCTG GCTCGGCAAT
CCGGTGCTGC TCATGGCCAT TGGCGTCACC TTGAGCCTGC AGTTGATCAT TATTTATGTC
CCGTTTTTCA ACACCGTGTT TCGCACCACG CCGCTGCGAC TGGAGGAACT GGGTTCTTGC
GTCGTTGGCG CCCTGGTGAT TATTCTGATT TCGGAATCGA AAAAACTGTT CCTGCGCCGC
AAGCGGCATT GA
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| Protein sequence | MNENKDITTN WHQLGQAAVV QKLQSSEMGL ASEEAGRRYD QYGPNELIEK GRKKPWRILL
AQVKEVMILI LLAAVVISAA LQEYIDAIVI FVIVVLNTLL GFWQEFKAEN AMAALKKMTV
PNVRVRRDGA EQQISAKDLV PGDILLIEAG NIVPADARLI VAANLKVQEA ALTGESESVD
KDTGELPDAE LALADRKNMI YRGTVVTYGR GEAVATATGM QTELGKIATM LQDVEDEQTP
LQERLAKLGR SLAMAAGVLI VIVAGMTYLQ GAGVKEIFMT AISMAVAAVP EGLPAVVTIA
LALGAQQMLK KNALIRQLPA VETLGGVTVI CSDKTGTLTQ NKMTVSDVVL PDRRYTLSEA
AARHGEDADL GLLLLTGTLC NDAVIDESAP NGILGDPTEG ALVLAAHQAG LVQRDLQAIL
PRVRELPFDS ERKRMSTVHA LPSSSQRATL HPVLAAGDQA QADHLVLVKG ATDGLIEACG
RILVSGVVHP LDERKKAEIS AENTAMAKNG LRVLGLAYRL LDVDELDQPD RYEHDLVFLG
MVCMLDPVRP EAIESVRLCK QAGIRPIMIT GDHPLTAVAI AKNLGLTTLD TVLTGKDLDA
MTVDALAARI KDVSVFARVS PKHKMIIIDA LQAQHEIVSM TGDGVNDAPA LKSADIGVAM
GITGTDVSKE SSDMILLDDN FATIVAAVKE GRRIYDNIRK FVRYILTGNA GEIVVMIAGP
LMGMPLPLLP IQILWINLVT DGVPAVALGF EEAERDVMNR PPYDPQEGIF ARGLGWQILV
MGLIVGLISV GTGYWFWDGG EGSTAWQTMV FTMLTFCQMA YALCVRKKTQ SLFSRSWLGN
PVLLMAIGVT LSLQLIIIYV PFFNTVFRTT PLRLEELGSC VVGALVIILI SESKKLFLRR
KRH
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