| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1813 |
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| Symbol | |
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| ID | 8377485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2067104 |
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| End bp | 2068684 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645001041 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_003158320 |
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| Protein GI | 256829592 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family
[TIGR00152] dephospho-CoA kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000964916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGAAT ATGTGGAGAA GGTTGGCGTC GCGGATGTCG GGCAGCGACT GGATGTTTTT
TGGCAGACCT GCCTTGAAGA GGAGGGCGTG GGCAGAAGCC GCGTTCAGGC CTGGATCAAG
GACGGGCGAG CGCGCATCAA CGGGCAGGTC TGCAGCAAGG CTGCGACCAG GCTCATGCCC
GGACAAACCC TGACACTTGC CCCCGAATAC ACTGATTCAA GCGTCGTTCC CGATGACGGG
CCCCTGAATG TATTTTTTGC CGATGAAGAT CTGGTCGTGG TCAACAAGAC TCCGGCCATG
ACCGTCCATC CAGCGCCGTC GGTAGCTGAG CCGACCCTTG TGCACCGGGT GGCCCATCAT
TTTCCGGCCT TGCTGTCTCA ATCCGGGGAG CGCCCGGGGA TCGTGCATCG CCTGGACAAA
GACACCTCCG GGCTCATCGT GCTGGCCTTG TCCGAGTCGG CCCGCCTGAG CCTGACTCAG
GCCTTCGCAT CCCGGGAGGT CTACAAGGAG TATCTGGCTC TGGTCGCCGG GGTGCCTGAT
TCCTCCGGGA CCGTGAGTCT TGCCTTGGGG CGGCATCCGA GCATCAAGAC GCGCATGGCC
GTGGTTGAAC GCGGCGGCCG CGCGGCCGAG ACCAGGTTTG AACTGCTCTG GAGCGCTGCC
GACAGGAGCG CTTCTTTGGT TCGGGTGCGC ATCATGACCG GGCGCACCCA CCAGATCCGG
GTGCATATGG CCGCGCTGGG TCATCCCCTT CTGGGGGACG CGGTCTATGC CGACAAGCAA
ACCGCTGCGC GCGCCCCCCG GCAGATGCTG CATGCCTGGC AGCTGCGTTT CGAGCATCCC
CGCAGTTTTG AATCCATGGA GTTTTGCGCG CCGCCGCCGG ATGATTTTCT GCAGGTGCTG
CGAGAGCTTT GCCGTGAACG GGCCTGCATC GGCCTGACCG GAGCCGTGGG CAGCGGAAAA
TCCACCGTCA GGGCAGTGGC CGAGGAGATG GGAGTGCCGG TCTTCTGTGC GGATCGGGTG
GTGGCCGAGG CCTATGCCAA GGGCGGGGAG GGCTGCGCCA TTCTGGAGCA TCATTTCGGG
ACCCGCTTCA CGCATCCCGG CGGAGGGGTG GACAAGGACC TGCTCCGCAG CGCCCTGGCC
GAGTCCGACA GCCTGCGCCG CGAGGTGGAG CGACTGGTTC ATCCGCTGGT TCGTCATGCC
CTGCACGCCT TCCGGGCCGC GCATGACGAG GACGTGACCC TGGCCGAGAT TCCCCTGCTG
TGCGAAGCGG GGCTGGCCGC AGAGATCGAC CTGCTGGCGG TGGTCTATTG CCCGGACCGT
CTGCGGCATG CCAGGCTGCA GGGCCGGGGC TGGAGCCCGG AGCGAATAGT CATGGTTGAT
TCCTGGCAAT GGCCCCAGGA CAGGAAGGTC GGCATGGCGC AGCTGGTGGT CGACAATTCC
GGTTCCCTGC AGGATCTTCA TTCCCGCGCG CGGGCTCTGA TCCAGGTCGT GCAGGAGATG
CTACGCGGCC ATGCCGAGCG GTGCGTCGAT GAACTGTGCG CCATTTTTGA AAACCCGGAC
ACCATGGAGG AGGCGGACTG A
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| Protein sequence | MQEYVEKVGV ADVGQRLDVF WQTCLEEEGV GRSRVQAWIK DGRARINGQV CSKAATRLMP
GQTLTLAPEY TDSSVVPDDG PLNVFFADED LVVVNKTPAM TVHPAPSVAE PTLVHRVAHH
FPALLSQSGE RPGIVHRLDK DTSGLIVLAL SESARLSLTQ AFASREVYKE YLALVAGVPD
SSGTVSLALG RHPSIKTRMA VVERGGRAAE TRFELLWSAA DRSASLVRVR IMTGRTHQIR
VHMAALGHPL LGDAVYADKQ TAARAPRQML HAWQLRFEHP RSFESMEFCA PPPDDFLQVL
RELCRERACI GLTGAVGSGK STVRAVAEEM GVPVFCADRV VAEAYAKGGE GCAILEHHFG
TRFTHPGGGV DKDLLRSALA ESDSLRREVE RLVHPLVRHA LHAFRAAHDE DVTLAEIPLL
CEAGLAAEID LLAVVYCPDR LRHARLQGRG WSPERIVMVD SWQWPQDRKV GMAQLVVDNS
GSLQDLHSRA RALIQVVQEM LRGHAERCVD ELCAIFENPD TMEEAD
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