More than 300 homologs were found in PanDaTox collection
for query gene Tmel_1715 on replicon NC_009616
Organism: Thermosipho melanesiensis BI429



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009616  Tmel_1703  binding-protein-dependent transport systems inner membrane component  72.54 
 
 
426 aa  641    Thermosipho melanesiensis BI429  Bacteria  normal  0.954451  n/a   
 
 
-
 
NC_009616  Tmel_1715  binding-protein-dependent transport systems inner membrane component  100 
 
 
426 aa  848    Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1536  binding-protein-dependent transport systems inner membrane component  43 
 
 
265 aa  164  2.0000000000000002e-39  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.00509999  n/a   
 
 
-
 
NC_010483  TRQ2_1585  binding-protein-dependent transport systems inner membrane component  42.5 
 
 
265 aa  164  3e-39  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5387  binding-protein-dependent transport systems inner membrane component  42 
 
 
285 aa  159  6e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.76333 
 
 
-
 
NC_008698  Tpen_1548  binding-protein-dependent transport systems inner membrane component  41.15 
 
 
270 aa  150  6e-35  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_013947  Snas_0171  binding-protein-dependent transport systems inner membrane component  38.76 
 
 
287 aa  147  5e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0670  binding-protein-dependent transport systems inner membrane component  40.11 
 
 
266 aa  144  3e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.295376 
 
 
-
 
NC_011899  Hore_19870  binding-protein-dependent transport systems inner membrane component  33.78 
 
 
285 aa  123  6e-27  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012853  Rleg_5696  binding-protein-dependent transport systems inner membrane component  36.87 
 
 
283 aa  120  3.9999999999999996e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.697019  normal  0.0828938 
 
 
-
 
NC_008043  TM1040_3397  binding-protein-dependent transport systems inner membrane component  37.09 
 
 
287 aa  119  9.999999999999999e-26  Ruegeria sp. TM1040  Bacteria  normal  0.141396  normal  0.659935 
 
 
-
 
NC_013530  Xcel_1047  binding-protein-dependent transport systems inner membrane component  36.53 
 
 
303 aa  119  9.999999999999999e-26  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0846293  n/a   
 
 
-
 
NC_004310  BR0237  sugar ABC transporter, permease protein  31.75 
 
 
291 aa  117  5e-25  Brucella suis 1330  Bacteria  normal  0.963709  n/a   
 
 
-
 
NC_009505  BOV_0230  sugar ABC transporter, permease protein  31.75 
 
 
291 aa  117  5e-25  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0701  binding-protein-dependent transport systems inner membrane component  34 
 
 
315 aa  116  6.9999999999999995e-25  Polaromonas sp. JS666  Bacteria  normal  0.338666  normal 
 
 
-
 
NC_011661  Dtur_1741  binding-protein-dependent transport systems inner membrane component  35 
 
 
281 aa  114  3e-24  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4977  binding-protein-dependent transport systems inner membrane component  31.35 
 
 
288 aa  112  2.0000000000000002e-23  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0547171 
 
 
-
 
NC_013595  Sros_5740  binding-protein-dependent transport systems inner membrane component  32.56 
 
 
289 aa  111  3e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.872391  normal  0.176709 
 
 
-
 
NC_009636  Smed_0188  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
277 aa  111  3e-23  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5860  binding-protein-dependent transport systems inner membrane component  34.16 
 
 
319 aa  111  3e-23  Sinorhizobium medicae WSM419  Bacteria  normal  0.235146  normal 
 
 
-
 
NC_009667  Oant_0311  binding-protein-dependent transport systems inner membrane component  30.28 
 
 
292 aa  111  3e-23  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.466995  n/a   
 
 
-
 
NC_011886  Achl_2899  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
316 aa  110  6e-23  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_0173  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
311 aa  110  6e-23  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2195  binding-protein-dependent transport systems inner membrane component  31.96 
 
 
276 aa  110  7.000000000000001e-23  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000532523  n/a   
 
 
-
 
NC_012848  Rleg_4987  binding-protein-dependent transport systems inner membrane component  33.02 
 
 
319 aa  109  8.000000000000001e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3407  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
277 aa  109  8.000000000000001e-23  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.353789  normal  0.790416 
 
 
-
 
NC_007494  RSP_3672  ABC sugar transporter, inner membrane subunit  33.68 
 
 
277 aa  109  1e-22  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.191343  n/a   
 
 
-
 
NC_013947  Snas_4646  binding-protein-dependent transport systems inner membrane component  39.05 
 
 
273 aa  108  2e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00194673 
 
 
-
 
NC_013947  Snas_1043  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
273 aa  107  3e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  decreased coverage  0.00118636  normal  0.712976 
 
 
-
 
NC_008541  Arth_0050  binding-protein-dependent transport systems inner membrane component  30.23 
 
 
305 aa  107  3e-22  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2280  binding-protein-dependent transport systems inner membrane component  32.33 
 
 
280 aa  107  5e-22  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.326107  normal 
 
 
-
 
NC_012850  Rleg_2428  binding-protein-dependent transport systems inner membrane component  32.56 
 
 
317 aa  107  6e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.443713  normal  0.627473 
 
 
-
 
NC_011661  Dtur_0489  binding-protein-dependent transport systems inner membrane component  28.38 
 
 
274 aa  106  7e-22  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2422  binding-protein-dependent transport systems inner membrane component  33.49 
 
 
277 aa  106  9e-22  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.161716 
 
 
-
 
NC_009952  Dshi_3142  sugar ABC transporter  32.09 
 
 
275 aa  106  9e-22  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.367291  normal 
 
 
-
 
NC_011366  Rleg2_5850  binding-protein-dependent transport systems inner membrane component  31.33 
 
 
276 aa  105  1e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.590535  normal 
 
 
-
 
NC_013093  Amir_2834  binding-protein-dependent transport systems inner membrane component  31.96 
 
 
275 aa  105  2e-21  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3620  binding-protein-dependent transport systems inner membrane component  32.95 
 
 
287 aa  104  3e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_03310  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
288 aa  104  4e-21  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0395  binding-protein-dependent transport systems inner membrane component  37.69 
 
 
277 aa  103  4e-21  Thermoanaerobacter sp. X514  Bacteria  normal  0.230637  n/a   
 
 
-
 
NC_012848  Rleg_4709  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
278 aa  103  5e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3493  binding-protein-dependent transport systems inner membrane component  30.54 
 
 
316 aa  103  6e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.552575 
 
 
-
 
NC_007908  Rfer_0952  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
271 aa  103  6e-21  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6763  binding-protein-dependent transport systems inner membrane component  31.33 
 
 
276 aa  103  7e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.18605  normal 
 
 
-
 
NC_010625  Bphy_6369  binding-protein-dependent transport systems inner membrane component  30.66 
 
 
317 aa  102  1e-20  Burkholderia phymatum STM815  Bacteria  normal  0.568723  normal 
 
 
-
 
NC_008698  Tpen_1057  binding-protein-dependent transport systems inner membrane component  34.65 
 
 
304 aa  102  1e-20  Thermofilum pendens Hrk 5  Archaea  normal  0.233223  n/a   
 
 
-
 
NC_009952  Dshi_0549  ABC-type sugar / sn-glycerol-3-phosphate transport system permease protein ugpE  33.5 
 
 
272 aa  101  2e-20  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1682  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
275 aa  102  2e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.299262  normal 
 
 
-
 
NC_007802  Jann_3555  binding-protein-dependent transport systems inner membrane component  33.95 
 
 
279 aa  102  2e-20  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_4088  binding-protein-dependent transport systems inner membrane component  32.09 
 
 
275 aa  102  2e-20  Jannaschia sp. CCS1  Bacteria  normal  normal  0.350213 
 
 
-
 
NC_008786  Veis_1881  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
277 aa  101  2e-20  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.31192  normal  0.345507 
 
 
-
 
NC_009667  Oant_0352  binding-protein-dependent transport systems inner membrane component  32.37 
 
 
277 aa  101  3e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_5636  binding-protein-dependent transport systems inner membrane component  30.66 
 
 
317 aa  100  4e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  0.330167  normal 
 
 
-
 
NC_010320  Teth514_2199  monosaccharide-transporting ATPase  32.57 
 
 
269 aa  100  4e-20  Thermoanaerobacter sp. X514  Bacteria  normal  0.139368  n/a   
 
 
-
 
NC_010524  Lcho_3327  binding-protein-dependent transport systems inner membrane component  36.13 
 
 
278 aa  100  5e-20  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011369  Rleg2_3667  binding-protein-dependent transport systems inner membrane component  34.62 
 
 
296 aa  99.8  9e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_00800  binding-protein-dependent transport systems inner membrane component  32.66 
 
 
280 aa  99.8  9e-20  Halothermothrix orenii H 168  Bacteria  normal  0.303025  n/a   
 
 
-
 
NC_008010  Dgeo_2818  binding-protein-dependent transport systems inner membrane component  28.63 
 
 
255 aa  99.4  1e-19  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3981  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
278 aa  99  1e-19  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008698  Tpen_1617  binding-protein-dependent transport systems inner membrane component  31.36 
 
 
291 aa  99  1e-19  Thermofilum pendens Hrk 5  Archaea  normal  0.333529  n/a   
 
 
-
 
NC_008705  Mkms_4055  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
278 aa  99  1e-19  Mycobacterium sp. KMS  Bacteria  normal  normal  0.898469 
 
 
-
 
NC_008709  Ping_3171  ABC sugar (glycerol) transporter binding protein inner membrane protein  29.83 
 
 
266 aa  99.4  1e-19  Psychromonas ingrahamii 37  Bacteria  normal  0.550599  normal 
 
 
-
 
NC_009077  Mjls_3995  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
278 aa  99.4  1e-19  Mycobacterium sp. JLS  Bacteria  normal  0.273063  normal  0.368954 
 
 
-
 
NC_013093  Amir_0350  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
297 aa  98.6  2e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0644  binding-protein-dependent transport systems inner membrane component  33.99 
 
 
283 aa  98.6  2e-19  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000450076  n/a   
 
 
-
 
NC_009620  Smed_3589  binding-protein-dependent transport systems inner membrane component  38.89 
 
 
276 aa  98.6  2e-19  Sinorhizobium medicae WSM419  Bacteria  normal  0.577285  normal 
 
 
-
 
NC_014151  Cfla_0962  binding-protein-dependent transport systems inner membrane component  33.83 
 
 
277 aa  98.6  2e-19  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0871909  hitchhiker  0.000355781 
 
 
-
 
NC_007963  Csal_2612  binding-protein-dependent transport systems inner membrane component  29.86 
 
 
276 aa  99  2e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20450  binding-protein-dependent transport systems inner membrane component  29.27 
 
 
277 aa  98.6  2e-19  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000244229  n/a   
 
 
-
 
NC_008699  Noca_0871  binding-protein-dependent transport systems inner membrane component  33.98 
 
 
284 aa  98.6  2e-19  Nocardioides sp. JS614  Bacteria  normal  0.288507  n/a   
 
 
-
 
NC_010483  TRQ2_0669  binding-protein-dependent transport systems inner membrane component  33.99 
 
 
283 aa  99  2e-19  Thermotoga sp. RQ2  Bacteria  normal  0.586722  n/a   
 
 
-
 
NC_009616  Tmel_1818  binding-protein-dependent transport systems inner membrane component  33.03 
 
 
279 aa  98.2  3e-19  Thermosipho melanesiensis BI429  Bacteria  normal  0.675174  n/a   
 
 
-
 
NC_013093  Amir_0809  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
281 aa  98.2  3e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1868  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
276 aa  98.2  3e-19  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008243  Meso_4515  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
275 aa  97.8  3e-19  Chelativorans sp. BNC1  Bacteria  normal  0.275064  n/a   
 
 
-
 
NC_012848  Rleg_5363  binding-protein-dependent transport systems inner membrane component  31.55 
 
 
285 aa  97.4  4e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.547781 
 
 
-
 
NC_012848  Rleg_4865  binding-protein-dependent transport systems inner membrane component  36.5 
 
 
296 aa  97.4  4e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.174421 
 
 
-
 
NC_013923  Nmag_3871  binding-protein-dependent transport systems inner membrane component  31.37 
 
 
284 aa  97.4  4e-19  Natrialba magadii ATCC 43099  Archaea  normal  0.0519592  n/a   
 
 
-
 
NC_009636  Smed_2144  binding-protein-dependent transport systems inner membrane component  30.41 
 
 
288 aa  97.1  5e-19  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4615  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
295 aa  97.1  6e-19  Frankia sp. EAN1pec  Bacteria  normal  0.60944  normal 
 
 
-
 
NC_008254  Meso_2303  binding-protein-dependent transport systems inner membrane component  30.36 
 
 
275 aa  97.1  6e-19  Chelativorans sp. BNC1  Bacteria  normal  0.313337  n/a   
 
 
-
 
NC_013174  Jden_0236  binding-protein-dependent transport systems inner membrane component  31.68 
 
 
271 aa  96.7  7e-19  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11262  sugar-transport integral membrane protein ABC transporter sugB  35 
 
 
274 aa  96.7  7e-19  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00203297 
 
 
-
 
NC_009636  Smed_2697  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
293 aa  96.7  8e-19  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_06510  carbohydrate ABC transporter membrane protein  35.02 
 
 
282 aa  96.3  8e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_04600  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
277 aa  96.7  8e-19  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3840  permease protein of sugar ABC transporter  29.95 
 
 
257 aa  96.3  9e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0859974  normal  0.0349833 
 
 
-
 
NC_009921  Franean1_7051  binding-protein-dependent transport systems inner membrane component  31.48 
 
 
279 aa  95.9  1e-18  Frankia sp. EAN1pec  Bacteria  normal  0.305839  normal 
 
 
-
 
NC_008541  Arth_3685  binding-protein-dependent transport systems inner membrane component  33.83 
 
 
299 aa  95.9  1e-18  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0956  binding-protein-dependent transport systems inner membrane component  31.63 
 
 
278 aa  95.9  1e-18  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0972  binding-protein-dependent transport systems inner membrane component  31.63 
 
 
278 aa  95.9  1e-18  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00136246  n/a   
 
 
-
 
NC_009664  Krad_1115  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
280 aa  95.1  2e-18  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.565272 
 
 
-
 
NC_011366  Rleg2_5746  binding-protein-dependent transport systems inner membrane component  33.78 
 
 
278 aa  95.1  2e-18  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.405999 
 
 
-
 
NC_014212  Mesil_3058  binding-protein-dependent transport systems inner membrane component  29.29 
 
 
286 aa  94.7  3e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3932  binding-protein-dependent transport systems inner membrane component  32.72 
 
 
277 aa  94.4  3e-18  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.410983  n/a   
 
 
-
 
NC_013131  Caci_2624  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
282 aa  94.7  3e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.313327  normal 
 
 
-
 
NC_009012  Cthe_1018  binding-protein-dependent transport systems inner membrane component  27.3 
 
 
289 aa  94.7  3e-18  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.062951  n/a   
 
 
-
 
NC_013223  Dret_2097  binding-protein-dependent transport systems inner membrane component  32.07 
 
 
265 aa  94  4e-18  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0908154 
 
 
-
 
NC_007802  Jann_1285  binding-protein-dependent transport systems inner membrane component  31.67 
 
 
404 aa  94  4e-18  Jannaschia sp. CCS1  Bacteria  normal  0.1795  normal  0.885594 
 
 
-
 
NC_014158  Tpau_1201  binding-protein-dependent transport systems inner membrane component  31.09 
 
 
277 aa  94.4  4e-18  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
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