| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1285 |
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| Symbol | |
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| ID | 3933732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1246300 |
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| End bp | 1247514 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637903635 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_509227 |
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| Protein GI | 89053776 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.1795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.885594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGA TCCGACGAGG GTTCGTGACA GGCCCTGTAC TGGGCGCGCT GTGGATGGTT
GTTCTATCGG TTACGGTGGC GGTCGCGATG TCCTTCGCAA CAGGGGACGC CTTTCGCCCA
AGTATATTGC TGTCATTGCT GTGGGGCGCG CTTGGGGGGG CCGCGGTTGT TTTCTTTCCG
CGCTCCTTGC TTGTGCAGGC GGGACTCTTC GTCGTGACTG CGGCGCTGGT ACTGGCGGGT
ATTGGCGCAT TGCAAACGGG GGTATCCACC GGTCCGTTTG CGCGTCTGAT TGGGGCCGCG
CTTTTGGCGG GAACGTTTGC GGTTTCGCTA TTGCCAATCC TGAAGGAGGT GGTGCCAGGC
GCTTTGAACC GACACGAGTT TGAAGGTGCA GTGATCCGTT TCCTTACCGG GTTCGGATAT
ATCTTTTTCA CAGCGATCGT GCTGATCCCC TTCTACGTGA TGGTCATGAC CAGCCTGAAA
AACCAGTCGC AGCTAATCCA GAATCCGCTG GATTTCTCCA TTGATTTTTC GCAGGGCGCA
GATCTGTTTC GCTCATACGG CGAGTTGTTC AGAGACTTCA ACTTCGGCAC CTATCTGTTG
AACTCCTTCT TCATCTCGGT TCTGACCGTT TTCATCACCC TGGCCTTTGC CATCCCCGGC
GCCTACGCGG TGGCGCGCCT GCGGTTCCGG GGACAGGCGG CGTTTTCGCG GTCTATCCTG
TTGATCTACA TGGTGCCGAT GATCGTGCTG GCGCTGCCGA TCTACATCGC CTTTTCGATG
ACCGGTCTGC GCAACTCCTT CGTCGGGATC GTCATGATCT ATCCCGTCAC GACCATCCCC
GTAGCGCTCT ACATGTTGCA GGGATACTTT CGGGGGCTGC CGTCAGAGAT AGAAGAAGCT
GGGTTGATGG ACGGTCTCAG CAGGTTGGCG GTGATCTGGA AGATCACGCT GCCATTGTCC
TTGCCGGCGC TGGCATCGGT ATCGCTTTAT GTCTTCATGA TTGCGTGGAA CGAGTTCCTG
CTGGCGTTCA TGTTGCTGGA TGACCCCACA CGTTTCACGC TGACGCGCGG CATCGCCGCC
CTCAACTCCT CTGAAATTCC ACGCCAACAT TTGATGGCGG GTTCTGTGAT TGCGACCGTT
CCGATTATGG CGCTGTTTCT GGGATTGGAA AAATTCATGA CCAAGGGCCT GACGGCGGGT
TCGGTCAAAG GATAA
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| Protein sequence | MSMIRRGFVT GPVLGALWMV VLSVTVAVAM SFATGDAFRP SILLSLLWGA LGGAAVVFFP
RSLLVQAGLF VVTAALVLAG IGALQTGVST GPFARLIGAA LLAGTFAVSL LPILKEVVPG
ALNRHEFEGA VIRFLTGFGY IFFTAIVLIP FYVMVMTSLK NQSQLIQNPL DFSIDFSQGA
DLFRSYGELF RDFNFGTYLL NSFFISVLTV FITLAFAIPG AYAVARLRFR GQAAFSRSIL
LIYMVPMIVL ALPIYIAFSM TGLRNSFVGI VMIYPVTTIP VALYMLQGYF RGLPSEIEEA
GLMDGLSRLA VIWKITLPLS LPALASVSLY VFMIAWNEFL LAFMLLDDPT RFTLTRGIAA
LNSSEIPRQH LMAGSVIATV PIMALFLGLE KFMTKGLTAG SVKG
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